Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 OS9-218ENST00000551035 2246 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 REXO1L11P-201ENST00000620964 1927 ntBASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 AC009237.3-201ENST00000393279 1427 ntBASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AC007614.5-201ENST00000623424 8892 ntBASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 MIR4281-201ENST00000580852 62 ntBASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AC008175.2-201ENST00000612840 297 ntBASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AL031719.1-201ENST00000623365 2587 ntBASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 GGT4P-201ENST00000623672 1708 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms