RNA–Protein interactions for RNA: ENST00000409341.5

SP100-204, Transcript of SP100 nuclear antigen, humanhuman

TSL 1 (best) BASIC

Gene SP100, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-204ENST00000409341 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
SP100-204ENST00000409341 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
SP100-204ENST00000409341 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
SP100-204ENST00000409341 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
SP100-204ENST00000409341 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
SP100-204ENST00000409341 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
SP100-204ENST00000409341 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.34
SP100-204ENST00000409341 ABCC9O60706 1549 aa29.65■■■□□ 2.34
SP100-204ENST00000409341 NACADO15069 1562 aa29.43■■■□□ 2.3
SP100-204ENST00000409341 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
SP100-204ENST00000409341 RB1CC1Q8TDY2 1594 aa29.11■■■□□ 2.25
SP100-204ENST00000409341 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
SP100-204ENST00000409341 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
SP100-204ENST00000409341 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
SP100-204ENST00000409341 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
SP100-204ENST00000409341 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
SP100-204ENST00000409341 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
SP100-204ENST00000409341 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
SP100-204ENST00000409341 WIZO95785 1651 aa28.02■■■□□ 2.08
SP100-204ENST00000409341 SMARCA4P51532 1647 aa28.01■■■□□ 2.07
SP100-204ENST00000409341 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
SP100-204ENST00000409341 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
SP100-204ENST00000409341 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
SP100-204ENST00000409341 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.02
SP100-204ENST00000409341 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
SP100-204ENST00000409341 ATAD2BQ9ULI0 1458 aa27.43■■□□□ 1.98
SP100-204ENST00000409341 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
SP100-204ENST00000409341 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
SP100-204ENST00000409341 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
SP100-204ENST00000409341 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
SP100-204ENST00000409341 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
SP100-204ENST00000409341 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
SP100-204ENST00000409341 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
SP100-204ENST00000409341 CC2D2AQ9P2K1 1620 aa26.86■■□□□ 1.89
SP100-204ENST00000409341 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
SP100-204ENST00000409341 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
SP100-204ENST00000409341 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
SP100-204ENST00000409341 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
SP100-204ENST00000409341 CFTRP13569 1480 aa26.63■■□□□ 1.85
SP100-204ENST00000409341 PRDM2Q13029 1718 aa26.6■■□□□ 1.85
SP100-204ENST00000409341 EEA1Q15075 1411 aa26.56■■□□□ 1.84
SP100-204ENST00000409341 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
SP100-204ENST00000409341 SOGA1O94964 1423 aa26.51■■□□□ 1.83
SP100-204ENST00000409341 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.83
SP100-204ENST00000409341 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
SP100-204ENST00000409341 RUSC2Q8N2Y8 1516 aa26.39■■□□□ 1.82
SP100-204ENST00000409341 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
SP100-204ENST00000409341 CUX1P39880 1505 aa26.36■■□□□ 1.81
SP100-204ENST00000409341 CSRNP3Q8WYN3 585 aa26.34■■□□□ 1.81
SP100-204ENST00000409341 KIF21BO75037 1637 aa26.22■■□□□ 1.79
SP100-204ENST00000409341 GOLGA3Q08378 1498 aa26.22■■□□□ 1.79
SP100-204ENST00000409341 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.78
SP100-204ENST00000409341 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
SP100-204ENST00000409341 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
SP100-204ENST00000409341 TNIKQ9UKE5 1360 aa26.17■■□□□ 1.78
SP100-204ENST00000409341 NESP48681 1621 aa26.13■■□□□ 1.77
SP100-204ENST00000409341 CEP162Q5TB80 1403 aa26.07■■□□□ 1.76
SP100-204ENST00000409341 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
SP100-204ENST00000409341 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
SP100-204ENST00000409341 UBTFP17480 764 aaKnown RBP26.04■■□□□ 1.76
SP100-204ENST00000409341 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
SP100-204ENST00000409341 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
SP100-204ENST00000409341 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
SP100-204ENST00000409341 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
SP100-204ENST00000409341 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
SP100-204ENST00000409341 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
SP100-204ENST00000409341 PRXQ9BXM0 1461 aa25.95■■□□□ 1.74
SP100-204ENST00000409341 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
SP100-204ENST00000409341 TRIM26Q12899 539 aaPredicted RBP25.92■■□□□ 1.74
SP100-204ENST00000409341 CUX2O14529 1486 aa25.91■■□□□ 1.74
SP100-204ENST00000409341 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
SP100-204ENST00000409341 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
SP100-204ENST00000409341 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
SP100-204ENST00000409341 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
SP100-204ENST00000409341 CLIP1P30622 1438 aa25.78■■□□□ 1.72
SP100-204ENST00000409341 IGF1RP08069 1367 aa25.75■■□□□ 1.71
SP100-204ENST00000409341 RAD54L2Q9Y4B4 1467 aa25.75■■□□□ 1.71
SP100-204ENST00000409341 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
SP100-204ENST00000409341 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.7
SP100-204ENST00000409341 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
SP100-204ENST00000409341 VPS8Q8N3P4 1428 aa25.61■■□□□ 1.69
SP100-204ENST00000409341 CUL7Q14999 1698 aa25.61■■□□□ 1.69
SP100-204ENST00000409341 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
SP100-204ENST00000409341 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
SP100-204ENST00000409341 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
SP100-204ENST00000409341 HRCP23327 699 aa25.52■■□□□ 1.68
SP100-204ENST00000409341 RANGAP1P46060 587 aaPredicted RBP25.51■■□□□ 1.67
SP100-204ENST00000409341 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
SP100-204ENST00000409341 GAPVD1Q14C86 1478 aa25.49■■□□□ 1.67
SP100-204ENST00000409341 WDR62O43379 1518 aa25.48■■□□□ 1.67
SP100-204ENST00000409341 TDRD9Q8NDG6 1382 aaKnown RBP25.46■■□□□ 1.67
SP100-204ENST00000409341 ARHGAP35Q9NRY4 1499 aa25.43■■□□□ 1.66
SP100-204ENST00000409341 ERCC6Q03468 1493 aa25.41■■□□□ 1.66
SP100-204ENST00000409341 CTTNBP2Q8WZ74 1663 aa25.39■■□□□ 1.65
SP100-204ENST00000409341 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
SP100-204ENST00000409341 APLP2Q06481 763 aa25.36■■□□□ 1.65
SP100-204ENST00000409341 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
SP100-204ENST00000409341 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
SP100-204ENST00000409341 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
SP100-204ENST00000409341 EFCAB5A4FU69 1503 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms