RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
SMARCA4-205ENST00000450717 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
SMARCA4-205ENST00000450717 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
SMARCA4-205ENST00000450717 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
SMARCA4-205ENST00000450717 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
SMARCA4-205ENST00000450717 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
SMARCA4-205ENST00000450717 APLP2Q06481 763 aa20.7■□□□□ 0.9
SMARCA4-205ENST00000450717 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
SMARCA4-205ENST00000450717 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
SMARCA4-205ENST00000450717 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
SMARCA4-205ENST00000450717 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
SMARCA4-205ENST00000450717 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
SMARCA4-205ENST00000450717 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.8
SMARCA4-205ENST00000450717 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
SMARCA4-205ENST00000450717 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
SMARCA4-205ENST00000450717 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
SMARCA4-205ENST00000450717 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
SMARCA4-205ENST00000450717 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
SMARCA4-205ENST00000450717 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
SMARCA4-205ENST00000450717 NEFLP07196 543 aa19.58■□□□□ 0.73
SMARCA4-205ENST00000450717 HRCP23327 699 aa19.49■□□□□ 0.71
SMARCA4-205ENST00000450717 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
SMARCA4-205ENST00000450717 PPARGC1BQ86YN6 1023 aaKnown RBP19.48■□□□□ 0.71
SMARCA4-205ENST00000450717 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
SMARCA4-205ENST00000450717 MYT1Q01538 1121 aa19.44■□□□□ 0.7
SMARCA4-205ENST00000450717 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
SMARCA4-205ENST00000450717 ITGAEP38570 1179 aa19.2■□□□□ 0.66
SMARCA4-205ENST00000450717 HNRNPUL2Q1KMD3 747 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-205ENST00000450717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
SMARCA4-205ENST00000450717 MYT1LQ9UL68 1186 aa18.99■□□□□ 0.63
SMARCA4-205ENST00000450717 POLR3GLQ9BT43 218 aa18.99■□□□□ 0.63
SMARCA4-205ENST00000450717 DAXXQ9UER7 740 aaPredicted RBP18.97■□□□□ 0.63
SMARCA4-205ENST00000450717 ABCC9O60706 1549 aa18.93■□□□□ 0.62
SMARCA4-205ENST00000450717 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
SMARCA4-205ENST00000450717 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-205ENST00000450717 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMARCA4-205ENST00000450717 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-205ENST00000450717 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
SMARCA4-205ENST00000450717 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
SMARCA4-205ENST00000450717 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-205ENST00000450717 ANP32CO43423 234 aa18.57■□□□□ 0.56
SMARCA4-205ENST00000450717 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
SMARCA4-205ENST00000450717 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
SMARCA4-205ENST00000450717 RTL5Q5HYW3 569 aaPredicted RBP18.53■□□□□ 0.56
SMARCA4-205ENST00000450717 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
SMARCA4-205ENST00000450717 CLSPNQ9HAW4 1339 aa18.5■□□□□ 0.55
SMARCA4-205ENST00000450717 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
SMARCA4-205ENST00000450717 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
SMARCA4-205ENST00000450717 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
SMARCA4-205ENST00000450717 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
SMARCA4-205ENST00000450717 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-205ENST00000450717 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
SMARCA4-205ENST00000450717 BCANQ96GW7 911 aa18.35■□□□□ 0.53
SMARCA4-205ENST00000450717 FBLN2P98095 1184 aa18.33■□□□□ 0.53
SMARCA4-205ENST00000450717 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
SMARCA4-205ENST00000450717 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
SMARCA4-205ENST00000450717 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-205ENST00000450717 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
SMARCA4-205ENST00000450717 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
SMARCA4-205ENST00000450717 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
SMARCA4-205ENST00000450717 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
SMARCA4-205ENST00000450717 NEFMP07197 916 aa18.12■□□□□ 0.49
SMARCA4-205ENST00000450717 ANP32AP39687 249 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-205ENST00000450717 EEA1Q15075 1411 aa17.99■□□□□ 0.47
SMARCA4-205ENST00000450717 CLIP1P30622 1438 aa17.96■□□□□ 0.47
SMARCA4-205ENST00000450717 FKBP8Q14318 412 aa17.96■□□□□ 0.47
SMARCA4-205ENST00000450717 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
SMARCA4-205ENST00000450717 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-205ENST00000450717 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMARCA4-205ENST00000450717 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
SMARCA4-205ENST00000450717 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
SMARCA4-205ENST00000450717 GOLGA3Q08378 1498 aa17.9■□□□□ 0.46
SMARCA4-205ENST00000450717 MTUS2Q5JR59 1369 aa17.89■□□□□ 0.46
SMARCA4-205ENST00000450717 FAM9BQ8IZU0 186 aa17.86■□□□□ 0.45
SMARCA4-205ENST00000450717 CHIC2Q9UKJ5 165 aa17.85■□□□□ 0.45
SMARCA4-205ENST00000450717 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.45
SMARCA4-205ENST00000450717 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.45
SMARCA4-205ENST00000450717 NACADO15069 1562 aa17.83■□□□□ 0.44
SMARCA4-205ENST00000450717 CEP162Q5TB80 1403 aa17.83■□□□□ 0.44
SMARCA4-205ENST00000450717 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
SMARCA4-205ENST00000450717 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
SMARCA4-205ENST00000450717 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
SMARCA4-205ENST00000450717 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-205ENST00000450717 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMARCA4-205ENST00000450717 TMC1Q8TDI8 760 aa17.8■□□□□ 0.44
SMARCA4-205ENST00000450717 BCL11AQ9H165 835 aa17.8■□□□□ 0.44
SMARCA4-205ENST00000450717 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
SMARCA4-205ENST00000450717 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-205ENST00000450717 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.44
SMARCA4-205ENST00000450717 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.435e-6■■□□□ 12.5
SMARCA4-205ENST00000450717 MRS2Q9HD23 443 aa17.74■□□□□ 0.43
SMARCA4-205ENST00000450717 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
SMARCA4-205ENST00000450717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.432e-8■■■□□ 18
SMARCA4-205ENST00000450717 MIER1Q8N108 512 aa17.73■□□□□ 0.43
SMARCA4-205ENST00000450717 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
SMARCA4-205ENST00000450717 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMARCA4-205ENST00000450717 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMARCA4-205ENST00000450717 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
SMARCA4-205ENST00000450717 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-205ENST00000450717 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms