RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 DCAF8L2P0C7V8 631 aa23.96■■□□□ 1.43
PROM2-201ENST00000317620 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
PROM2-201ENST00000317620 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
PROM2-201ENST00000317620 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
PROM2-201ENST00000317620 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
PROM2-201ENST00000317620 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
PROM2-201ENST00000317620 APLP2Q06481 763 aa21.34■■□□□ 1.01
PROM2-201ENST00000317620 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
PROM2-201ENST00000317620 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
PROM2-201ENST00000317620 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
PROM2-201ENST00000317620 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
PROM2-201ENST00000317620 UBTFP17480 764 aaKnown RBP20.78■□□□□ 0.92
PROM2-201ENST00000317620 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
PROM2-201ENST00000317620 ATP1B4Q9UN42 357 aaPredicted RBP20.7■□□□□ 0.9
PROM2-201ENST00000317620 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
PROM2-201ENST00000317620 ZEB1P37275 1124 aaPredicted RBP20.59■□□□□ 0.89
PROM2-201ENST00000317620 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
PROM2-201ENST00000317620 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
PROM2-201ENST00000317620 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
PROM2-201ENST00000317620 LOC105371045A0A1W2PR82 267 aa20.33■□□□□ 0.85
PROM2-201ENST00000317620 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
PROM2-201ENST00000317620 ABCC9O60706 1549 aa20.1■□□□□ 0.81
PROM2-201ENST00000317620 ITGAEP38570 1179 aa20.08■□□□□ 0.8
PROM2-201ENST00000317620 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
PROM2-201ENST00000317620 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
PROM2-201ENST00000317620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
PROM2-201ENST00000317620 HRCP23327 699 aa20■□□□□ 0.79
PROM2-201ENST00000317620 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
PROM2-201ENST00000317620 NEFLP07196 543 aa19.89■□□□□ 0.78
PROM2-201ENST00000317620 ERICH6Q7L0X2 663 aa19.85■□□□□ 0.77
PROM2-201ENST00000317620 MYT1LQ9UL68 1186 aa19.8■□□□□ 0.76
PROM2-201ENST00000317620 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
PROM2-201ENST00000317620 MYT1Q01538 1121 aa19.6■□□□□ 0.73
PROM2-201ENST00000317620 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
PROM2-201ENST00000317620 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
PROM2-201ENST00000317620 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
PROM2-201ENST00000317620 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
PROM2-201ENST00000317620 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
PROM2-201ENST00000317620 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
PROM2-201ENST00000317620 FBLN2P98095 1184 aa19.36■□□□□ 0.69
PROM2-201ENST00000317620 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.69
PROM2-201ENST00000317620 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
PROM2-201ENST00000317620 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
PROM2-201ENST00000317620 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
PROM2-201ENST00000317620 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
PROM2-201ENST00000317620 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
PROM2-201ENST00000317620 DAXXQ9UER7 740 aaPredicted RBP19.16■□□□□ 0.66
PROM2-201ENST00000317620 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
PROM2-201ENST00000317620 ANP32CO43423 234 aa19.05■□□□□ 0.64
PROM2-201ENST00000317620 ZNF777Q9ULD5 760 aaPredicted RBP19■□□□□ 0.63
PROM2-201ENST00000317620 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
PROM2-201ENST00000317620 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
PROM2-201ENST00000317620 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
PROM2-201ENST00000317620 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
PROM2-201ENST00000317620 BCANQ96GW7 911 aa18.93■□□□□ 0.62
PROM2-201ENST00000317620 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
PROM2-201ENST00000317620 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
PROM2-201ENST00000317620 TONSLQ96HA7 1378 aa18.74■□□□□ 0.59
PROM2-201ENST00000317620 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
PROM2-201ENST00000317620 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
PROM2-201ENST00000317620 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
PROM2-201ENST00000317620 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.58
PROM2-201ENST00000317620 CLIP1P30622 1438 aa18.67■□□□□ 0.58
PROM2-201ENST00000317620 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
PROM2-201ENST00000317620 MTUS2Q5JR59 1369 aa18.63■□□□□ 0.57
PROM2-201ENST00000317620 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
PROM2-201ENST00000317620 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
PROM2-201ENST00000317620 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
PROM2-201ENST00000317620 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
PROM2-201ENST00000317620 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
PROM2-201ENST00000317620 NEFMP07197 916 aa18.59■□□□□ 0.57
PROM2-201ENST00000317620 NACADO15069 1562 aa18.57■□□□□ 0.56
PROM2-201ENST00000317620 TSPY4P0CV99 314 aa18.57■□□□□ 0.56
PROM2-201ENST00000317620 TSPY10P0CW01 314 aa18.57■□□□□ 0.56
PROM2-201ENST00000317620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.57■□□□□ 0.56
PROM2-201ENST00000317620 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
PROM2-201ENST00000317620 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
PROM2-201ENST00000317620 ESF1Q9H501 851 aaKnown RBP18.56■□□□□ 0.56
PROM2-201ENST00000317620 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
PROM2-201ENST00000317620 EEA1Q15075 1411 aa18.54■□□□□ 0.56
PROM2-201ENST00000317620 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
PROM2-201ENST00000317620 CEP162Q5TB80 1403 aa18.52■□□□□ 0.56
PROM2-201ENST00000317620 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.55
PROM2-201ENST00000317620 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
PROM2-201ENST00000317620 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
PROM2-201ENST00000317620 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
PROM2-201ENST00000317620 GOLGA3Q08378 1498 aa18.5■□□□□ 0.55
PROM2-201ENST00000317620 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
PROM2-201ENST00000317620 RRP7BPQ9NSQ0 103 aa18.47■□□□□ 0.55
PROM2-201ENST00000317620 FKBP8Q14318 412 aa18.46■□□□□ 0.55
PROM2-201ENST00000317620 HIRIP3Q9BW71 556 aaPredicted RBP18.44■□□□□ 0.54
PROM2-201ENST00000317620 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
PROM2-201ENST00000317620 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
PROM2-201ENST00000317620 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
PROM2-201ENST00000317620 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
PROM2-201ENST00000317620 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
PROM2-201ENST00000317620 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
PROM2-201ENST00000317620 MIER1Q8N108 512 aa18.38■□□□□ 0.53
PROM2-201ENST00000317620 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
PROM2-201ENST00000317620 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms