RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
EBF1-201ENST00000313708 MYT1Q01538 1121 aa20.39■□□□□ 0.86
EBF1-201ENST00000313708 HRCP23327 699 aa20.12■□□□□ 0.81
EBF1-201ENST00000313708 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
EBF1-201ENST00000313708 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
EBF1-201ENST00000313708 PPARGC1BQ86YN6 1023 aaKnown RBP19.84■□□□□ 0.77
EBF1-201ENST00000313708 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
EBF1-201ENST00000313708 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
EBF1-201ENST00000313708 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
EBF1-201ENST00000313708 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
EBF1-201ENST00000313708 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
EBF1-201ENST00000313708 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
EBF1-201ENST00000313708 YTHDC1Q96MU7 727 aaKnown RBP19.05■□□□□ 0.64
EBF1-201ENST00000313708 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
EBF1-201ENST00000313708 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
EBF1-201ENST00000313708 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
EBF1-201ENST00000313708 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
EBF1-201ENST00000313708 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
EBF1-201ENST00000313708 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
EBF1-201ENST00000313708 ERICH6Q7L0X2 663 aa18.73■□□□□ 0.59
EBF1-201ENST00000313708 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
EBF1-201ENST00000313708 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
EBF1-201ENST00000313708 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
EBF1-201ENST00000313708 DIEXFQ68CQ4 756 aaKnown RBP18.66■□□□□ 0.58
EBF1-201ENST00000313708 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
EBF1-201ENST00000313708 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
EBF1-201ENST00000313708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
EBF1-201ENST00000313708 NEFLP07196 543 aa18.26■□□□□ 0.51
EBF1-201ENST00000313708 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
EBF1-201ENST00000313708 ANP32EQ9BTT0 268 aa18.23■□□□□ 0.51
EBF1-201ENST00000313708 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
EBF1-201ENST00000313708 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
EBF1-201ENST00000313708 BCANQ96GW7 911 aa18.13■□□□□ 0.49
EBF1-201ENST00000313708 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
EBF1-201ENST00000313708 CCDC180Q9P1Z9 1646 aa17.97■□□□□ 0.47
EBF1-201ENST00000313708 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
EBF1-201ENST00000313708 APLP2Q06481 763 aa17.88■□□□□ 0.45
EBF1-201ENST00000313708 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
EBF1-201ENST00000313708 PRKCSHP14314 528 aaPredicted RBP17.84■□□□□ 0.45
EBF1-201ENST00000313708 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
EBF1-201ENST00000313708 MIER1Q8N108 512 aa17.81■□□□□ 0.44
EBF1-201ENST00000313708 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
EBF1-201ENST00000313708 FKBP8Q14318 412 aa17.7■□□□□ 0.42
EBF1-201ENST00000313708 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
EBF1-201ENST00000313708 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
EBF1-201ENST00000313708 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
EBF1-201ENST00000313708 MYT1LQ9UL68 1186 aa17.63■□□□□ 0.41
EBF1-201ENST00000313708 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
EBF1-201ENST00000313708 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
EBF1-201ENST00000313708 NBR1Q14596 966 aa17.56■□□□□ 0.4
EBF1-201ENST00000313708 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
EBF1-201ENST00000313708 ITGAEP38570 1179 aa17.53■□□□□ 0.4
EBF1-201ENST00000313708 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
EBF1-201ENST00000313708 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
EBF1-201ENST00000313708 RTN4Q9NQC3 1192 aaKnown RBP17.42■□□□□ 0.38
EBF1-201ENST00000313708 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
EBF1-201ENST00000313708 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
EBF1-201ENST00000313708 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
EBF1-201ENST00000313708 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
EBF1-201ENST00000313708 GLIPR1L2Q4G1C9 344 aa17.28■□□□□ 0.36
EBF1-201ENST00000313708 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
EBF1-201ENST00000313708 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
EBF1-201ENST00000313708 ANP32CO43423 234 aa17.22■□□□□ 0.35
EBF1-201ENST00000313708 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
EBF1-201ENST00000313708 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
EBF1-201ENST00000313708 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
EBF1-201ENST00000313708 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
EBF1-201ENST00000313708 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.33
EBF1-201ENST00000313708 ERICH6BQ5W0A0 696 aa17.06■□□□□ 0.32
EBF1-201ENST00000313708 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
EBF1-201ENST00000313708 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
EBF1-201ENST00000313708 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
EBF1-201ENST00000313708 NEFMP07197 916 aa16.93■□□□□ 0.3
EBF1-201ENST00000313708 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
EBF1-201ENST00000313708 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
EBF1-201ENST00000313708 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
EBF1-201ENST00000313708 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
EBF1-201ENST00000313708 PKNOX2Q96KN3 472 aa16.8■□□□□ 0.28
EBF1-201ENST00000313708 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
EBF1-201ENST00000313708 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
EBF1-201ENST00000313708 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
EBF1-201ENST00000313708 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
EBF1-201ENST00000313708 MSH5O43196 834 aa16.79■□□□□ 0.28
EBF1-201ENST00000313708 IL27Q8NEV9 243 aa16.77■□□□□ 0.28
EBF1-201ENST00000313708 ARXQ96QS3 562 aa16.76■□□□□ 0.27
EBF1-201ENST00000313708 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
EBF1-201ENST00000313708 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
EBF1-201ENST00000313708 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
EBF1-201ENST00000313708 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
EBF1-201ENST00000313708 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
EBF1-201ENST00000313708 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
EBF1-201ENST00000313708 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
EBF1-201ENST00000313708 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
EBF1-201ENST00000313708 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
EBF1-201ENST00000313708 IPO9Q96P70 1041 aaKnown RBP16.64■□□□□ 0.25
EBF1-201ENST00000313708 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
EBF1-201ENST00000313708 PODXL2Q9NZ53 605 aa16.58■□□□□ 0.25
EBF1-201ENST00000313708 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
EBF1-201ENST00000313708 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
EBF1-201ENST00000313708 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms