RNA–Protein interactions for RNA: ENST00000428647.1

LINC01873-201, Transcript of long intergenic non-protein coding RNA 1873, humanhuman

TSL 1 (best) BASIC

Gene LINC01873, Length 1,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01873-201ENST00000428647 NISCHQ9Y2I1 1504 aa29.8■■■□□ 2.36
LINC01873-201ENST00000428647 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.7
LINC01873-201ENST00000428647 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
LINC01873-201ENST00000428647 DCAF1Q9Y4B6 1507 aa24.83■■□□□ 1.57
LINC01873-201ENST00000428647 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
LINC01873-201ENST00000428647 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
LINC01873-201ENST00000428647 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
LINC01873-201ENST00000428647 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.42
LINC01873-201ENST00000428647 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
LINC01873-201ENST00000428647 ABCC9O60706 1549 aa23.88■■□□□ 1.41
LINC01873-201ENST00000428647 NACADO15069 1562 aa23.63■■□□□ 1.37
LINC01873-201ENST00000428647 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
LINC01873-201ENST00000428647 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
LINC01873-201ENST00000428647 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
LINC01873-201ENST00000428647 HRCP23327 699 aa23.27■■□□□ 1.32
LINC01873-201ENST00000428647 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
LINC01873-201ENST00000428647 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
LINC01873-201ENST00000428647 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
LINC01873-201ENST00000428647 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
LINC01873-201ENST00000428647 TRIM26Q12899 539 aaPredicted RBP22.87■■□□□ 1.25
LINC01873-201ENST00000428647 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
LINC01873-201ENST00000428647 WIZO95785 1651 aa22.85■■□□□ 1.25
LINC01873-201ENST00000428647 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
LINC01873-201ENST00000428647 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
LINC01873-201ENST00000428647 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
LINC01873-201ENST00000428647 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
LINC01873-201ENST00000428647 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
LINC01873-201ENST00000428647 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
LINC01873-201ENST00000428647 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
LINC01873-201ENST00000428647 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
LINC01873-201ENST00000428647 EEA1Q15075 1411 aa22.45■■□□□ 1.19
LINC01873-201ENST00000428647 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
LINC01873-201ENST00000428647 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
LINC01873-201ENST00000428647 WRNQ14191 1432 aaPredicted RBP eCLIP22.33■■□□□ 1.16
LINC01873-201ENST00000428647 FAM9AQ8IZU1 332 aaPredicted RBP22.26■■□□□ 1.15
LINC01873-201ENST00000428647 PPARGC1BQ86YN6 1023 aaKnown RBP22.25■■□□□ 1.15
LINC01873-201ENST00000428647 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
LINC01873-201ENST00000428647 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
LINC01873-201ENST00000428647 KIF21BO75037 1637 aa22.06■■□□□ 1.12
LINC01873-201ENST00000428647 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
LINC01873-201ENST00000428647 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
LINC01873-201ENST00000428647 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
LINC01873-201ENST00000428647 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
LINC01873-201ENST00000428647 SOGA1O94964 1423 aa21.97■■□□□ 1.11
LINC01873-201ENST00000428647 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
LINC01873-201ENST00000428647 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
LINC01873-201ENST00000428647 SYNJ1O43426 1573 aa21.89■■□□□ 1.1
LINC01873-201ENST00000428647 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
LINC01873-201ENST00000428647 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
LINC01873-201ENST00000428647 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
LINC01873-201ENST00000428647 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
LINC01873-201ENST00000428647 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.08
LINC01873-201ENST00000428647 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
LINC01873-201ENST00000428647 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
LINC01873-201ENST00000428647 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
LINC01873-201ENST00000428647 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
LINC01873-201ENST00000428647 CCER1Q8TC90 406 aaPredicted RBP21.69■■□□□ 1.06
LINC01873-201ENST00000428647 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
LINC01873-201ENST00000428647 CLIP1P30622 1438 aa21.66■■□□□ 1.06
LINC01873-201ENST00000428647 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
LINC01873-201ENST00000428647 PRXQ9BXM0 1461 aa21.56■■□□□ 1.04
LINC01873-201ENST00000428647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
LINC01873-201ENST00000428647 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
LINC01873-201ENST00000428647 CFTRP13569 1480 aa21.52■■□□□ 1.03
LINC01873-201ENST00000428647 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
LINC01873-201ENST00000428647 KIF27Q86VH2 1401 aa21.44■■□□□ 1.02
LINC01873-201ENST00000428647 CUX1P39880 1505 aa21.43■■□□□ 1.02
LINC01873-201ENST00000428647 CLSPNQ9HAW4 1339 aa21.42■■□□□ 1.02
LINC01873-201ENST00000428647 APLP2Q06481 763 aa21.41■■□□□ 1.02
LINC01873-201ENST00000428647 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
LINC01873-201ENST00000428647 ARAP1Q96P48 1450 aa21.33■■□□□ 1
LINC01873-201ENST00000428647 MAP3K1Q13233 1512 aa21.3■■□□□ 1
LINC01873-201ENST00000428647 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
LINC01873-201ENST00000428647 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
LINC01873-201ENST00000428647 RRBP1Q9P2E9 1410 aaKnown RBP21.24■□□□□ 0.99
LINC01873-201ENST00000428647 CUX2O14529 1486 aa21.24■□□□□ 0.99
LINC01873-201ENST00000428647 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
LINC01873-201ENST00000428647 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
LINC01873-201ENST00000428647 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
LINC01873-201ENST00000428647 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
LINC01873-201ENST00000428647 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.97
LINC01873-201ENST00000428647 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.96
LINC01873-201ENST00000428647 IGF1RP08069 1367 aa21.06■□□□□ 0.96
LINC01873-201ENST00000428647 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
LINC01873-201ENST00000428647 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
LINC01873-201ENST00000428647 FGD5Q6ZNL6 1462 aa21.04■□□□□ 0.96
LINC01873-201ENST00000428647 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
LINC01873-201ENST00000428647 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
LINC01873-201ENST00000428647 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
LINC01873-201ENST00000428647 CFAP43Q8NDM7 1665 aa21.03■□□□□ 0.96
LINC01873-201ENST00000428647 CUL7Q14999 1698 aa21.02■□□□□ 0.95
LINC01873-201ENST00000428647 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
LINC01873-201ENST00000428647 EFCAB5A4FU69 1503 aa21.01■□□□□ 0.95
LINC01873-201ENST00000428647 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
LINC01873-201ENST00000428647 CARMIL1Q5VZK9 1371 aa20.99■□□□□ 0.95
LINC01873-201ENST00000428647 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
LINC01873-201ENST00000428647 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
LINC01873-201ENST00000428647 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
LINC01873-201ENST00000428647 KANK4Q5T7N3 995 aaPredicted RBP20.91■□□□□ 0.94
LINC01873-201ENST00000428647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms