RNA–Protein interactions for RNA: ENST00000559488.5

ITGB3-201, Transcript of integrin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB3, Length 3,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-201ENST00000559488 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
ITGB3-201ENST00000559488 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
ITGB3-201ENST00000559488 SHROOM4Q9ULL8 1493 aa24.9■■□□□ 1.58
ITGB3-201ENST00000559488 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
ITGB3-201ENST00000559488 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
ITGB3-201ENST00000559488 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
ITGB3-201ENST00000559488 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
ITGB3-201ENST00000559488 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
ITGB3-201ENST00000559488 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
ITGB3-201ENST00000559488 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
ITGB3-201ENST00000559488 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
ITGB3-201ENST00000559488 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
ITGB3-201ENST00000559488 HRCP23327 699 aa22.82■■□□□ 1.24
ITGB3-201ENST00000559488 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
ITGB3-201ENST00000559488 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.21
ITGB3-201ENST00000559488 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
ITGB3-201ENST00000559488 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
ITGB3-201ENST00000559488 ABCC9O60706 1549 aa22.38■■□□□ 1.17
ITGB3-201ENST00000559488 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
ITGB3-201ENST00000559488 ZEB1P37275 1124 aaPredicted RBP22.14■■□□□ 1.14
ITGB3-201ENST00000559488 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
ITGB3-201ENST00000559488 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
ITGB3-201ENST00000559488 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
ITGB3-201ENST00000559488 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
ITGB3-201ENST00000559488 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
ITGB3-201ENST00000559488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.88■■□□□ 1.09
ITGB3-201ENST00000559488 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
ITGB3-201ENST00000559488 APLP2Q06481 763 aa21.81■■□□□ 1.08
ITGB3-201ENST00000559488 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
ITGB3-201ENST00000559488 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
ITGB3-201ENST00000559488 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
ITGB3-201ENST00000559488 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.03
ITGB3-201ENST00000559488 NACADO15069 1562 aa21.51■■□□□ 1.03
ITGB3-201ENST00000559488 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
ITGB3-201ENST00000559488 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
ITGB3-201ENST00000559488 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
ITGB3-201ENST00000559488 DIEXFQ68CQ4 756 aaKnown RBP21.38■■□□□ 1.01
ITGB3-201ENST00000559488 WIZO95785 1651 aa21.33■■□□□ 1.01
ITGB3-201ENST00000559488 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
ITGB3-201ENST00000559488 ITGAEP38570 1179 aa21.24■□□□□ 0.99
ITGB3-201ENST00000559488 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
ITGB3-201ENST00000559488 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
ITGB3-201ENST00000559488 CEP162Q5TB80 1403 aa21.16■□□□□ 0.98
ITGB3-201ENST00000559488 SOGA1O94964 1423 aa21.15■□□□□ 0.98
ITGB3-201ENST00000559488 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
ITGB3-201ENST00000559488 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
ITGB3-201ENST00000559488 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
ITGB3-201ENST00000559488 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
ITGB3-201ENST00000559488 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
ITGB3-201ENST00000559488 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
ITGB3-201ENST00000559488 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
ITGB3-201ENST00000559488 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
ITGB3-201ENST00000559488 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
ITGB3-201ENST00000559488 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
ITGB3-201ENST00000559488 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
ITGB3-201ENST00000559488 CLIP1P30622 1438 aa20.91■□□□□ 0.94
ITGB3-201ENST00000559488 RUSC2Q8N2Y8 1516 aa20.91■□□□□ 0.94
ITGB3-201ENST00000559488 EEA1Q15075 1411 aa20.9■□□□□ 0.94
ITGB3-201ENST00000559488 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
ITGB3-201ENST00000559488 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
ITGB3-201ENST00000559488 P3H3Q8IVL6 736 aa20.78■□□□□ 0.92
ITGB3-201ENST00000559488 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
ITGB3-201ENST00000559488 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
ITGB3-201ENST00000559488 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
ITGB3-201ENST00000559488 MIER1Q8N108 512 aa20.74■□□□□ 0.91
ITGB3-201ENST00000559488 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
ITGB3-201ENST00000559488 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
ITGB3-201ENST00000559488 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
ITGB3-201ENST00000559488 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
ITGB3-201ENST00000559488 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
ITGB3-201ENST00000559488 NEFLP07196 543 aa20.39■□□□□ 0.85
ITGB3-201ENST00000559488 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
ITGB3-201ENST00000559488 BCANQ96GW7 911 aa20.38■□□□□ 0.85
ITGB3-201ENST00000559488 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
ITGB3-201ENST00000559488 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
ITGB3-201ENST00000559488 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
ITGB3-201ENST00000559488 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
ITGB3-201ENST00000559488 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
ITGB3-201ENST00000559488 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
ITGB3-201ENST00000559488 CUX2O14529 1486 aa20.28■□□□□ 0.84
ITGB3-201ENST00000559488 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
ITGB3-201ENST00000559488 BICRAQ9NZM4 1560 aa20.27■□□□□ 0.84
ITGB3-201ENST00000559488 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
ITGB3-201ENST00000559488 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
ITGB3-201ENST00000559488 POLR3GLQ9BT43 218 aa20.22■□□□□ 0.83
ITGB3-201ENST00000559488 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
ITGB3-201ENST00000559488 ANP32CO43423 234 aa20.2■□□□□ 0.82
ITGB3-201ENST00000559488 KIF21BO75037 1637 aa20.2■□□□□ 0.82
ITGB3-201ENST00000559488 CLSPNQ9HAW4 1339 aa20.19■□□□□ 0.82
ITGB3-201ENST00000559488 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
ITGB3-201ENST00000559488 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
ITGB3-201ENST00000559488 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
ITGB3-201ENST00000559488 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
ITGB3-201ENST00000559488 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
ITGB3-201ENST00000559488 FKBP8Q14318 412 aa20.08■□□□□ 0.8
ITGB3-201ENST00000559488 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
ITGB3-201ENST00000559488 MYT1Q01538 1121 aa20.05■□□□□ 0.8
ITGB3-201ENST00000559488 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
ITGB3-201ENST00000559488 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
ITGB3-201ENST00000559488 TOP2BQ02880 1626 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms