RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
SCNN1A-215ENST00000540037 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.46
SCNN1A-215ENST00000540037 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
SCNN1A-215ENST00000540037 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
SCNN1A-215ENST00000540037 HRCP23327 699 aa23.38■■□□□ 1.33
SCNN1A-215ENST00000540037 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
SCNN1A-215ENST00000540037 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
SCNN1A-215ENST00000540037 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
SCNN1A-215ENST00000540037 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
SCNN1A-215ENST00000540037 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
SCNN1A-215ENST00000540037 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
SCNN1A-215ENST00000540037 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
SCNN1A-215ENST00000540037 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.21
SCNN1A-215ENST00000540037 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
SCNN1A-215ENST00000540037 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
SCNN1A-215ENST00000540037 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
SCNN1A-215ENST00000540037 TRIM41Q8WV44 630 aa22.08■■□□□ 1.12
SCNN1A-215ENST00000540037 ABCC9O60706 1549 aa22.06■■□□□ 1.12
SCNN1A-215ENST00000540037 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
SCNN1A-215ENST00000540037 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
SCNN1A-215ENST00000540037 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
SCNN1A-215ENST00000540037 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
SCNN1A-215ENST00000540037 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
SCNN1A-215ENST00000540037 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
SCNN1A-215ENST00000540037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
SCNN1A-215ENST00000540037 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
SCNN1A-215ENST00000540037 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
SCNN1A-215ENST00000540037 NEUROD1Q13562 356 aa21.53■■□□□ 1.04
SCNN1A-215ENST00000540037 TTBK1Q5TCY1 1321 aaPredicted RBP21.51■■□□□ 1.03
SCNN1A-215ENST00000540037 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
SCNN1A-215ENST00000540037 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
SCNN1A-215ENST00000540037 WIZO95785 1651 aa21.42■■□□□ 1.02
SCNN1A-215ENST00000540037 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
SCNN1A-215ENST00000540037 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
SCNN1A-215ENST00000540037 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
SCNN1A-215ENST00000540037 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
SCNN1A-215ENST00000540037 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
SCNN1A-215ENST00000540037 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
SCNN1A-215ENST00000540037 BAZ1AQ9NRL2 1556 aaPredicted RBP21.15■□□□□ 0.98
SCNN1A-215ENST00000540037 NACADO15069 1562 aa21.13■□□□□ 0.97
SCNN1A-215ENST00000540037 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
SCNN1A-215ENST00000540037 SOGA1O94964 1423 aa21.1■□□□□ 0.97
SCNN1A-215ENST00000540037 YTHDC1Q96MU7 727 aaKnown RBP21.09■□□□□ 0.97
SCNN1A-215ENST00000540037 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.96
SCNN1A-215ENST00000540037 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
SCNN1A-215ENST00000540037 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
SCNN1A-215ENST00000540037 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
SCNN1A-215ENST00000540037 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
SCNN1A-215ENST00000540037 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
SCNN1A-215ENST00000540037 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
SCNN1A-215ENST00000540037 MIER1Q8N108 512 aa20.92■□□□□ 0.94
SCNN1A-215ENST00000540037 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
SCNN1A-215ENST00000540037 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
SCNN1A-215ENST00000540037 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
SCNN1A-215ENST00000540037 GOLGA3Q08378 1498 aa20.75■□□□□ 0.91
SCNN1A-215ENST00000540037 RANGAP1P46060 587 aaPredicted RBP20.73■□□□□ 0.91
SCNN1A-215ENST00000540037 EEA1Q15075 1411 aa20.72■□□□□ 0.91
SCNN1A-215ENST00000540037 MYT1Q01538 1121 aa20.63■□□□□ 0.89
SCNN1A-215ENST00000540037 CLIP1P30622 1438 aa20.62■□□□□ 0.89
SCNN1A-215ENST00000540037 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.88
SCNN1A-215ENST00000540037 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
SCNN1A-215ENST00000540037 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
SCNN1A-215ENST00000540037 SYNJ1O43426 1573 aa20.56■□□□□ 0.88
SCNN1A-215ENST00000540037 APLP2Q06481 763 aa20.53■□□□□ 0.88
SCNN1A-215ENST00000540037 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
SCNN1A-215ENST00000540037 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
SCNN1A-215ENST00000540037 KIF21BO75037 1637 aa20.48■□□□□ 0.87
SCNN1A-215ENST00000540037 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.86
SCNN1A-215ENST00000540037 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
SCNN1A-215ENST00000540037 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
SCNN1A-215ENST00000540037 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
SCNN1A-215ENST00000540037 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
SCNN1A-215ENST00000540037 KCNH8Q96L42 1107 aa20.27■□□□□ 0.84
SCNN1A-215ENST00000540037 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
SCNN1A-215ENST00000540037 ITGAEP38570 1179 aa20.24■□□□□ 0.83
SCNN1A-215ENST00000540037 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
SCNN1A-215ENST00000540037 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
SCNN1A-215ENST00000540037 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
SCNN1A-215ENST00000540037 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
SCNN1A-215ENST00000540037 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
SCNN1A-215ENST00000540037 BCANQ96GW7 911 aa20.12■□□□□ 0.81
SCNN1A-215ENST00000540037 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
SCNN1A-215ENST00000540037 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
SCNN1A-215ENST00000540037 CCNB3Q8WWL7 1395 aa20.06■□□□□ 0.8
SCNN1A-215ENST00000540037 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
SCNN1A-215ENST00000540037 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
SCNN1A-215ENST00000540037 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
SCNN1A-215ENST00000540037 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
SCNN1A-215ENST00000540037 CUX2O14529 1486 aa19.99■□□□□ 0.79
SCNN1A-215ENST00000540037 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
SCNN1A-215ENST00000540037 ARHGAP35Q9NRY4 1499 aa19.98■□□□□ 0.79
SCNN1A-215ENST00000540037 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
SCNN1A-215ENST00000540037 MAPKBP1O60336 1514 aa19.97■□□□□ 0.79
SCNN1A-215ENST00000540037 FKBP8Q14318 412 aa19.97■□□□□ 0.79
SCNN1A-215ENST00000540037 ANP32EQ9BTT0 268 aa19.97■□□□□ 0.79
SCNN1A-215ENST00000540037 CUX1P39880 1505 aa19.95■□□□□ 0.78
SCNN1A-215ENST00000540037 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
SCNN1A-215ENST00000540037 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
SCNN1A-215ENST00000540037 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
SCNN1A-215ENST00000540037 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
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