RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 MYT1Q01538 1121 aa20.14■□□□□ 0.81
CCBE1-202ENST00000439986 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
CCBE1-202ENST00000439986 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
CCBE1-202ENST00000439986 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
CCBE1-202ENST00000439986 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
CCBE1-202ENST00000439986 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
CCBE1-202ENST00000439986 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
CCBE1-202ENST00000439986 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
CCBE1-202ENST00000439986 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
CCBE1-202ENST00000439986 RANGAP1P46060 587 aaPredicted RBP18.72■□□□□ 0.59
CCBE1-202ENST00000439986 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
CCBE1-202ENST00000439986 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
CCBE1-202ENST00000439986 APLP2Q06481 763 aa17.82■□□□□ 0.44
CCBE1-202ENST00000439986 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
CCBE1-202ENST00000439986 HRCP23327 699 aa17.65■□□□□ 0.42
CCBE1-202ENST00000439986 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
CCBE1-202ENST00000439986 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
CCBE1-202ENST00000439986 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
CCBE1-202ENST00000439986 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
CCBE1-202ENST00000439986 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
CCBE1-202ENST00000439986 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
CCBE1-202ENST00000439986 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
CCBE1-202ENST00000439986 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
CCBE1-202ENST00000439986 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.37
CCBE1-202ENST00000439986 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
CCBE1-202ENST00000439986 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
CCBE1-202ENST00000439986 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
CCBE1-202ENST00000439986 DAXXQ9UER7 740 aaPredicted RBP17.15■□□□□ 0.34
CCBE1-202ENST00000439986 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
CCBE1-202ENST00000439986 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
CCBE1-202ENST00000439986 NEFLP07196 543 aa17.04■□□□□ 0.32
CCBE1-202ENST00000439986 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
CCBE1-202ENST00000439986 MYT1LQ9UL68 1186 aa16.93■□□□□ 0.3
CCBE1-202ENST00000439986 ITGAEP38570 1179 aa16.84■□□□□ 0.29
CCBE1-202ENST00000439986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
CCBE1-202ENST00000439986 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
CCBE1-202ENST00000439986 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
CCBE1-202ENST00000439986 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
CCBE1-202ENST00000439986 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
CCBE1-202ENST00000439986 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
CCBE1-202ENST00000439986 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
CCBE1-202ENST00000439986 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
CCBE1-202ENST00000439986 HOMEZQ8IX15 550 aa16.6■□□□□ 0.25
CCBE1-202ENST00000439986 ACIN1Q9UKV3 1341 aaKnown RBP16.51■□□□□ 0.23
CCBE1-202ENST00000439986 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
CCBE1-202ENST00000439986 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
CCBE1-202ENST00000439986 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
CCBE1-202ENST00000439986 CDK11BP21127 795 aaKnown RBP16.4■□□□□ 0.22
CCBE1-202ENST00000439986 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
CCBE1-202ENST00000439986 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
CCBE1-202ENST00000439986 MYO15BQ96JP2 1530 aa16.39■□□□□ 0.22
CCBE1-202ENST00000439986 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
CCBE1-202ENST00000439986 BCL11AQ9H165 835 aa16.35■□□□□ 0.21
CCBE1-202ENST00000439986 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
CCBE1-202ENST00000439986 TULP1O00294 542 aaPredicted RBP16.34■□□□□ 0.21
CCBE1-202ENST00000439986 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
CCBE1-202ENST00000439986 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
CCBE1-202ENST00000439986 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
CCBE1-202ENST00000439986 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.19
CCBE1-202ENST00000439986 BCANQ96GW7 911 aa16.26■□□□□ 0.19
CCBE1-202ENST00000439986 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
CCBE1-202ENST00000439986 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
CCBE1-202ENST00000439986 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
CCBE1-202ENST00000439986 FAM50AQ14320 339 aaKnown RBP16.22■□□□□ 0.19
CCBE1-202ENST00000439986 ARXQ96QS3 562 aa16.2■□□□□ 0.18
CCBE1-202ENST00000439986 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
CCBE1-202ENST00000439986 TRIM52Q96A61 297 aa16.18■□□□□ 0.18
CCBE1-202ENST00000439986 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
CCBE1-202ENST00000439986 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
CCBE1-202ENST00000439986 ABCC9O60706 1549 aa16.06■□□□□ 0.16
CCBE1-202ENST00000439986 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
CCBE1-202ENST00000439986 ANP32CO43423 234 aa16■□□□□ 0.15
CCBE1-202ENST00000439986 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
CCBE1-202ENST00000439986 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
CCBE1-202ENST00000439986 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCBE1-202ENST00000439986 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
CCBE1-202ENST00000439986 PTMSP20962 102 aa15.96■□□□□ 0.15
CCBE1-202ENST00000439986 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
CCBE1-202ENST00000439986 FBLN2P98095 1184 aa15.95■□□□□ 0.14
CCBE1-202ENST00000439986 MIER1Q8N108 512 aa15.94■□□□□ 0.14
CCBE1-202ENST00000439986 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
CCBE1-202ENST00000439986 ARID3AQ99856 593 aa15.89■□□□□ 0.13
CCBE1-202ENST00000439986 FKBP8Q14318 412 aa15.87■□□□□ 0.13
CCBE1-202ENST00000439986 NCLP19338 710 aaKnown RBP15.83■□□□□ 0.12
CCBE1-202ENST00000439986 ARID4BQ4LE39 1312 aaPredicted RBP15.83■□□□□ 0.12
CCBE1-202ENST00000439986 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
CCBE1-202ENST00000439986 A0A0U1RQG5 324 aaPredicted RBP15.78■□□□□ 0.12
CCBE1-202ENST00000439986 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
CCBE1-202ENST00000439986 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
CCBE1-202ENST00000439986 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
CCBE1-202ENST00000439986 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
CCBE1-202ENST00000439986 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
CCBE1-202ENST00000439986 NBR1Q14596 966 aa15.71■□□□□ 0.11
CCBE1-202ENST00000439986 NEFMP07197 916 aa15.71■□□□□ 0.11
CCBE1-202ENST00000439986 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCBE1-202ENST00000439986 CLIP1P30622 1438 aa15.66■□□□□ 0.1
CCBE1-202ENST00000439986 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
CCBE1-202ENST00000439986 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
CCBE1-202ENST00000439986 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
CCBE1-202ENST00000439986 PDE4CQ08493 712 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms