RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
SLC28A1-203ENST00000394573 HRCP23327 699 aa21.5■■□□□ 1.03
SLC28A1-203ENST00000394573 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
SLC28A1-203ENST00000394573 MYT1Q01538 1121 aa21.06■□□□□ 0.96
SLC28A1-203ENST00000394573 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
SLC28A1-203ENST00000394573 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
SLC28A1-203ENST00000394573 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
SLC28A1-203ENST00000394573 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
SLC28A1-203ENST00000394573 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
SLC28A1-203ENST00000394573 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.8
SLC28A1-203ENST00000394573 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
SLC28A1-203ENST00000394573 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SLC28A1-203ENST00000394573 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
SLC28A1-203ENST00000394573 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
SLC28A1-203ENST00000394573 FAM9AQ8IZU1 332 aaPredicted RBP19.92■□□□□ 0.78
SLC28A1-203ENST00000394573 PRKCSHP14314 528 aaPredicted RBP19.91■□□□□ 0.78
SLC28A1-203ENST00000394573 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
SLC28A1-203ENST00000394573 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
SLC28A1-203ENST00000394573 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
SLC28A1-203ENST00000394573 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
SLC28A1-203ENST00000394573 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
SLC28A1-203ENST00000394573 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
SLC28A1-203ENST00000394573 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
SLC28A1-203ENST00000394573 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
SLC28A1-203ENST00000394573 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
SLC28A1-203ENST00000394573 ANP32EQ9BTT0 268 aa19.37■□□□□ 0.69
SLC28A1-203ENST00000394573 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
SLC28A1-203ENST00000394573 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
SLC28A1-203ENST00000394573 ERICH6Q7L0X2 663 aa19.13■□□□□ 0.65
SLC28A1-203ENST00000394573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
SLC28A1-203ENST00000394573 APLP2Q06481 763 aa18.99■□□□□ 0.63
SLC28A1-203ENST00000394573 TSHZ2Q9NRE2 1034 aa18.98■□□□□ 0.63
SLC28A1-203ENST00000394573 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
SLC28A1-203ENST00000394573 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
SLC28A1-203ENST00000394573 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
SLC28A1-203ENST00000394573 MIER1Q8N108 512 aa18.8■□□□□ 0.6
SLC28A1-203ENST00000394573 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
SLC28A1-203ENST00000394573 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
SLC28A1-203ENST00000394573 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
SLC28A1-203ENST00000394573 BCANQ96GW7 911 aa18.58■□□□□ 0.56
SLC28A1-203ENST00000394573 CCDC136Q96JN2 1154 aa18.55■□□□□ 0.56
SLC28A1-203ENST00000394573 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
SLC28A1-203ENST00000394573 RBM19Q9Y4C8 960 aaKnown RBP18.45■□□□□ 0.54
SLC28A1-203ENST00000394573 MSH5O43196 834 aa18.42■□□□□ 0.54
SLC28A1-203ENST00000394573 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.52
SLC28A1-203ENST00000394573 CLSPNQ9HAW4 1339 aa18.32■□□□□ 0.52
SLC28A1-203ENST00000394573 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
SLC28A1-203ENST00000394573 ITGAEP38570 1179 aa18.25■□□□□ 0.51
SLC28A1-203ENST00000394573 UBE2Q2Q8WVN8 375 aa18.24■□□□□ 0.51
SLC28A1-203ENST00000394573 FKBP8Q14318 412 aa18.22■□□□□ 0.51
SLC28A1-203ENST00000394573 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
SLC28A1-203ENST00000394573 EIF5BO60841 1220 aaKnown RBP18.07■□□□□ 0.48
SLC28A1-203ENST00000394573 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
SLC28A1-203ENST00000394573 NBR1Q14596 966 aa18.04■□□□□ 0.48
SLC28A1-203ENST00000394573 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
SLC28A1-203ENST00000394573 PLEKHG5O94827 1062 aa17.99■□□□□ 0.47
SLC28A1-203ENST00000394573 ERICH6BQ5W0A0 696 aa17.94■□□□□ 0.46
SLC28A1-203ENST00000394573 MYT1LQ9UL68 1186 aa17.93■□□□□ 0.46
SLC28A1-203ENST00000394573 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
SLC28A1-203ENST00000394573 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
SLC28A1-203ENST00000394573 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
SLC28A1-203ENST00000394573 NEFLP07196 543 aa17.9■□□□□ 0.46
SLC28A1-203ENST00000394573 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
SLC28A1-203ENST00000394573 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
SLC28A1-203ENST00000394573 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
SLC28A1-203ENST00000394573 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
SLC28A1-203ENST00000394573 IRX6P78412 446 aaPredicted RBP17.74■□□□□ 0.43
SLC28A1-203ENST00000394573 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
SLC28A1-203ENST00000394573 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
SLC28A1-203ENST00000394573 PODXL2Q9NZ53 605 aa17.69■□□□□ 0.42
SLC28A1-203ENST00000394573 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
SLC28A1-203ENST00000394573 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
SLC28A1-203ENST00000394573 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
SLC28A1-203ENST00000394573 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
SLC28A1-203ENST00000394573 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
SLC28A1-203ENST00000394573 ZMYND15Q9H091 742 aa17.45■□□□□ 0.38
SLC28A1-203ENST00000394573 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
SLC28A1-203ENST00000394573 DAXXQ9UER7 740 aaPredicted RBP17.43■□□□□ 0.38
SLC28A1-203ENST00000394573 B4GALNT3Q6L9W6 998 aa17.4■□□□□ 0.38
SLC28A1-203ENST00000394573 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SLC28A1-203ENST00000394573 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
SLC28A1-203ENST00000394573 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
SLC28A1-203ENST00000394573 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
SLC28A1-203ENST00000394573 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
SLC28A1-203ENST00000394573 NEFMP07197 916 aa17.32■□□□□ 0.36
SLC28A1-203ENST00000394573 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
SLC28A1-203ENST00000394573 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
SLC28A1-203ENST00000394573 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
SLC28A1-203ENST00000394573 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
SLC28A1-203ENST00000394573 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.36
SLC28A1-203ENST00000394573 GLIPR1L2Q4G1C9 344 aa17.27■□□□□ 0.35
SLC28A1-203ENST00000394573 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
SLC28A1-203ENST00000394573 C11orf95C9JLR9 678 aaPredicted RBP17.25■□□□□ 0.35
SLC28A1-203ENST00000394573 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
SLC28A1-203ENST00000394573 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
SLC28A1-203ENST00000394573 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
SLC28A1-203ENST00000394573 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
SLC28A1-203ENST00000394573 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
SLC28A1-203ENST00000394573 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
SLC28A1-203ENST00000394573 ANP32CO43423 234 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms