RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
SCN8A-202ENST00000355133 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
SCN8A-202ENST00000355133 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
SCN8A-202ENST00000355133 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
SCN8A-202ENST00000355133 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
SCN8A-202ENST00000355133 APLP2Q06481 763 aa20.86■□□□□ 0.93
SCN8A-202ENST00000355133 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
SCN8A-202ENST00000355133 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
SCN8A-202ENST00000355133 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
SCN8A-202ENST00000355133 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
SCN8A-202ENST00000355133 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
SCN8A-202ENST00000355133 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
SCN8A-202ENST00000355133 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
SCN8A-202ENST00000355133 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
SCN8A-202ENST00000355133 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
SCN8A-202ENST00000355133 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
SCN8A-202ENST00000355133 CENPBP07199 599 aaPredicted RBP19.96■□□□□ 0.79
SCN8A-202ENST00000355133 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
SCN8A-202ENST00000355133 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
SCN8A-202ENST00000355133 YTHDC1Q96MU7 727 aaKnown RBP19.75■□□□□ 0.75
SCN8A-202ENST00000355133 NEFLP07196 543 aa19.67■□□□□ 0.74
SCN8A-202ENST00000355133 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
SCN8A-202ENST00000355133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
SCN8A-202ENST00000355133 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
SCN8A-202ENST00000355133 ITGAEP38570 1179 aa19.52■□□□□ 0.72
SCN8A-202ENST00000355133 POLR3GLQ9BT43 218 aa19.46■□□□□ 0.71
SCN8A-202ENST00000355133 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
SCN8A-202ENST00000355133 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
SCN8A-202ENST00000355133 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
SCN8A-202ENST00000355133 LOC105371045A0A1W2PR82 267 aa19.25■□□□□ 0.67
SCN8A-202ENST00000355133 DAXXQ9UER7 740 aaPredicted RBP19.18■□□□□ 0.66
SCN8A-202ENST00000355133 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
SCN8A-202ENST00000355133 HRCP23327 699 aa19.14■□□□□ 0.65
SCN8A-202ENST00000355133 MYT1Q01538 1121 aa18.97■□□□□ 0.63
SCN8A-202ENST00000355133 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
SCN8A-202ENST00000355133 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCN8A-202ENST00000355133 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
SCN8A-202ENST00000355133 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
SCN8A-202ENST00000355133 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
SCN8A-202ENST00000355133 ABCC9O60706 1549 aa18.76■□□□□ 0.59
SCN8A-202ENST00000355133 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
SCN8A-202ENST00000355133 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
SCN8A-202ENST00000355133 ZNF326Q5BKZ1 582 aaKnown RBP18.72■□□□□ 0.59
SCN8A-202ENST00000355133 FBLN2P98095 1184 aa18.72■□□□□ 0.59
SCN8A-202ENST00000355133 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
SCN8A-202ENST00000355133 BCANQ96GW7 911 aa18.57■□□□□ 0.56
SCN8A-202ENST00000355133 ARID3CA6NKF2 412 aa18.56■□□□□ 0.56
SCN8A-202ENST00000355133 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
SCN8A-202ENST00000355133 ANP32CO43423 234 aa18.51■□□□□ 0.55
SCN8A-202ENST00000355133 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
SCN8A-202ENST00000355133 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
SCN8A-202ENST00000355133 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
SCN8A-202ENST00000355133 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
SCN8A-202ENST00000355133 ZNF777Q9ULD5 760 aaPredicted RBP18.39■□□□□ 0.53
SCN8A-202ENST00000355133 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
SCN8A-202ENST00000355133 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
SCN8A-202ENST00000355133 NEFMP07197 916 aa18.32■□□□□ 0.52
SCN8A-202ENST00000355133 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
SCN8A-202ENST00000355133 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
SCN8A-202ENST00000355133 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
SCN8A-202ENST00000355133 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
SCN8A-202ENST00000355133 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
SCN8A-202ENST00000355133 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
SCN8A-202ENST00000355133 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
SCN8A-202ENST00000355133 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCN8A-202ENST00000355133 TONSLQ96HA7 1378 aa18.02■□□□□ 0.48
SCN8A-202ENST00000355133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
SCN8A-202ENST00000355133 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
SCN8A-202ENST00000355133 SALL2Q9Y467 1007 aaPredicted RBP17.98■□□□□ 0.47
SCN8A-202ENST00000355133 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
SCN8A-202ENST00000355133 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
SCN8A-202ENST00000355133 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
SCN8A-202ENST00000355133 FKBP8Q14318 412 aa17.93■□□□□ 0.46
SCN8A-202ENST00000355133 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCN8A-202ENST00000355133 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
SCN8A-202ENST00000355133 HSP90AA1P07900 732 aaKnown RBP17.9■□□□□ 0.46
SCN8A-202ENST00000355133 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
SCN8A-202ENST00000355133 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
SCN8A-202ENST00000355133 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
SCN8A-202ENST00000355133 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
SCN8A-202ENST00000355133 UPF2Q9HAU5 1272 aaKnown RBP17.81■□□□□ 0.44
SCN8A-202ENST00000355133 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
SCN8A-202ENST00000355133 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
SCN8A-202ENST00000355133 ANP32BQ92688 251 aaKnown RBP17.78■□□□□ 0.44
SCN8A-202ENST00000355133 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCN8A-202ENST00000355133 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.43
SCN8A-202ENST00000355133 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
SCN8A-202ENST00000355133 A0A0G2JS52 829 aa17.74■□□□□ 0.43
SCN8A-202ENST00000355133 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
SCN8A-202ENST00000355133 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
SCN8A-202ENST00000355133 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
SCN8A-202ENST00000355133 HIRIP3Q9BW71 556 aaPredicted RBP17.72■□□□□ 0.43
SCN8A-202ENST00000355133 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
SCN8A-202ENST00000355133 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
SCN8A-202ENST00000355133 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
SCN8A-202ENST00000355133 RRP7BPQ9NSQ0 103 aa17.67■□□□□ 0.42
SCN8A-202ENST00000355133 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
SCN8A-202ENST00000355133 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
SCN8A-202ENST00000355133 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
SCN8A-202ENST00000355133 ARXQ96QS3 562 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms