Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHAMP1Q96JM3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 AL805961.1-202ENST00000641562 540 ntBASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.05■□□□□ 0.64
CHAMP1Q96JM3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 SSR4P1-203ENST00000599569 2260 ntBASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 AC073621.1-201ENST00000392730 636 ntBASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 PRELID1P1-202ENST00000567272 903 ntBASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.04■□□□□ 0.64
CHAMP1Q96JM3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms