RNA–Protein interactions for RNA: ENST00000400111.8

EPB41L3-203, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5 BASIC

Gene EPB41L3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-203ENST00000400111 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
EPB41L3-203ENST00000400111 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
EPB41L3-203ENST00000400111 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
EPB41L3-203ENST00000400111 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
EPB41L3-203ENST00000400111 HRCP23327 699 aa26.05■■□□□ 1.76
EPB41L3-203ENST00000400111 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
EPB41L3-203ENST00000400111 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
EPB41L3-203ENST00000400111 MYT1Q01538 1121 aa25.78■■□□□ 1.72
EPB41L3-203ENST00000400111 PPARGC1BQ86YN6 1023 aaKnown RBP25.55■■□□□ 1.68
EPB41L3-203ENST00000400111 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
EPB41L3-203ENST00000400111 CENPBP07199 599 aaPredicted RBP25.29■■□□□ 1.64
EPB41L3-203ENST00000400111 EHMT2Q96KQ7 1210 aa25.1■■□□□ 1.61
EPB41L3-203ENST00000400111 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
EPB41L3-203ENST00000400111 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
EPB41L3-203ENST00000400111 CCER1Q8TC90 406 aaPredicted RBP24.81■■□□□ 1.56
EPB41L3-203ENST00000400111 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
EPB41L3-203ENST00000400111 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
EPB41L3-203ENST00000400111 YTHDC1Q96MU7 727 aaKnown RBP24.65■■□□□ 1.54
EPB41L3-203ENST00000400111 GTF3C3Q9Y5Q9 886 aa24.51■■□□□ 1.51
EPB41L3-203ENST00000400111 TTBK1Q5TCY1 1321 aaPredicted RBP24.48■■□□□ 1.51
EPB41L3-203ENST00000400111 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
EPB41L3-203ENST00000400111 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
EPB41L3-203ENST00000400111 ACIN1Q9UKV3 1341 aaKnown RBP24.39■■□□□ 1.5
EPB41L3-203ENST00000400111 DIEXFQ68CQ4 756 aaKnown RBP24.32■■□□□ 1.48
EPB41L3-203ENST00000400111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
EPB41L3-203ENST00000400111 ERICH6Q7L0X2 663 aa24.15■■□□□ 1.46
EPB41L3-203ENST00000400111 NEUROD1Q13562 356 aa24.08■■□□□ 1.44
EPB41L3-203ENST00000400111 APLP2Q06481 763 aa24.01■■□□□ 1.43
EPB41L3-203ENST00000400111 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
EPB41L3-203ENST00000400111 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
EPB41L3-203ENST00000400111 NEFLP07196 543 aa23.87■■□□□ 1.41
EPB41L3-203ENST00000400111 ZNF316A6NFI3 1004 aaPredicted RBP23.66■■□□□ 1.38
EPB41L3-203ENST00000400111 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
EPB41L3-203ENST00000400111 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
EPB41L3-203ENST00000400111 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
EPB41L3-203ENST00000400111 BCANQ96GW7 911 aa23.43■■□□□ 1.34
EPB41L3-203ENST00000400111 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.34
EPB41L3-203ENST00000400111 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
EPB41L3-203ENST00000400111 ANP32EQ9BTT0 268 aa23.24■■□□□ 1.31
EPB41L3-203ENST00000400111 MIER1Q8N108 512 aa23.22■■□□□ 1.31
EPB41L3-203ENST00000400111 BCL11AQ9H165 835 aa23.19■■□□□ 1.3
EPB41L3-203ENST00000400111 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
EPB41L3-203ENST00000400111 FKBP8Q14318 412 aa22.99■■□□□ 1.27
EPB41L3-203ENST00000400111 ITGAEP38570 1179 aa22.98■■□□□ 1.27
EPB41L3-203ENST00000400111 CDK11AQ9UQ88 783 aaPredicted RBP22.98■■□□□ 1.27
EPB41L3-203ENST00000400111 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
EPB41L3-203ENST00000400111 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
EPB41L3-203ENST00000400111 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
EPB41L3-203ENST00000400111 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
EPB41L3-203ENST00000400111 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
EPB41L3-203ENST00000400111 ANP32CO43423 234 aa22.73■■□□□ 1.23
EPB41L3-203ENST00000400111 DAXXQ9UER7 740 aaPredicted RBP22.66■■□□□ 1.22
EPB41L3-203ENST00000400111 TSHZ2Q9NRE2 1034 aa22.65■■□□□ 1.22
EPB41L3-203ENST00000400111 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
EPB41L3-203ENST00000400111 NBR1Q14596 966 aa22.54■■□□□ 1.2
EPB41L3-203ENST00000400111 DDX10Q13206 875 aaKnown RBP22.53■■□□□ 1.2
EPB41L3-203ENST00000400111 EIF5BO60841 1220 aaKnown RBP22.48■■□□□ 1.19
EPB41L3-203ENST00000400111 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
EPB41L3-203ENST00000400111 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
EPB41L3-203ENST00000400111 RBM19Q9Y4C8 960 aaKnown RBP22.47■■□□□ 1.19
EPB41L3-203ENST00000400111 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
EPB41L3-203ENST00000400111 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
EPB41L3-203ENST00000400111 IRX6P78412 446 aaPredicted RBP22.35■■□□□ 1.17
EPB41L3-203ENST00000400111 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
EPB41L3-203ENST00000400111 ZBTB47Q9UFB7 747 aaPredicted RBP22.27■■□□□ 1.16
EPB41L3-203ENST00000400111 DEKP35659 375 aaKnown RBP22.26■■□□□ 1.15
EPB41L3-203ENST00000400111 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
EPB41L3-203ENST00000400111 NPM2Q86SE8 214 aaKnown RBP22.26■■□□□ 1.15
EPB41L3-203ENST00000400111 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
EPB41L3-203ENST00000400111 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
EPB41L3-203ENST00000400111 RTN4Q9NQC3 1192 aaKnown RBP22.13■■□□□ 1.13
EPB41L3-203ENST00000400111 CCDC136Q96JN2 1154 aa22.08■■□□□ 1.12
EPB41L3-203ENST00000400111 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
EPB41L3-203ENST00000400111 NOP58Q9Y2X3 529 aaKnown RBP22.06■■□□□ 1.12
EPB41L3-203ENST00000400111 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
EPB41L3-203ENST00000400111 GLIPR1L2Q4G1C9 344 aa22.01■■□□□ 1.11
EPB41L3-203ENST00000400111 PPP4R2Q9NY27 417 aa21.98■■□□□ 1.11
EPB41L3-203ENST00000400111 CLIP1P30622 1438 aa21.98■■□□□ 1.11
EPB41L3-203ENST00000400111 TONSLQ96HA7 1378 aa21.96■■□□□ 1.11
EPB41L3-203ENST00000400111 PRKCSHP14314 528 aaPredicted RBP21.93■■□□□ 1.1
EPB41L3-203ENST00000400111 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
EPB41L3-203ENST00000400111 B4GALNT3Q6L9W6 998 aa21.89■■□□□ 1.09
EPB41L3-203ENST00000400111 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
EPB41L3-203ENST00000400111 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
EPB41L3-203ENST00000400111 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
EPB41L3-203ENST00000400111 EEA1Q15075 1411 aa21.84■■□□□ 1.09
EPB41L3-203ENST00000400111 NEFMP07197 916 aa21.83■■□□□ 1.09
EPB41L3-203ENST00000400111 CCER2I3L3R5 266 aa21.83■■□□□ 1.08
EPB41L3-203ENST00000400111 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.82■■□□□ 1.08
EPB41L3-203ENST00000400111 FANCIQ9NVI1 1328 aa21.81■■□□□ 1.08
EPB41L3-203ENST00000400111 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
EPB41L3-203ENST00000400111 LAS1LQ9Y4W2 734 aaKnown RBP21.79■■□□□ 1.08
EPB41L3-203ENST00000400111 ERICH6BQ5W0A0 696 aa21.79■■□□□ 1.08
EPB41L3-203ENST00000400111 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
EPB41L3-203ENST00000400111 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
EPB41L3-203ENST00000400111 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
EPB41L3-203ENST00000400111 ZNF326Q5BKZ1 582 aaKnown RBP21.72■■□□□ 1.07
EPB41L3-203ENST00000400111 SOGA1O94964 1423 aa21.66■■□□□ 1.06
EPB41L3-203ENST00000400111 ANO8Q9HCE9 1232 aaPredicted RBP21.66■■□□□ 1.06
EPB41L3-203ENST00000400111 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms