RNA–Protein interactions for RNA: ENST00000452015.8

PPP1R3E-201, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3E, Length 4,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-201ENST00000452015 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
PPP1R3E-201ENST00000452015 DCAF8L2P0C7V8 631 aa30.36■■■□□ 2.45
PPP1R3E-201ENST00000452015 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
PPP1R3E-201ENST00000452015 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
PPP1R3E-201ENST00000452015 EHMT2Q96KQ7 1210 aa27.51■■□□□ 1.99
PPP1R3E-201ENST00000452015 FAM9AQ8IZU1 332 aaPredicted RBP27.01■■□□□ 1.92
PPP1R3E-201ENST00000452015 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
PPP1R3E-201ENST00000452015 APLP2Q06481 763 aa26.59■■□□□ 1.85
PPP1R3E-201ENST00000452015 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
PPP1R3E-201ENST00000452015 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
PPP1R3E-201ENST00000452015 PCGF6Q9BYE7 350 aa26.32■■□□□ 1.8
PPP1R3E-201ENST00000452015 ABCC9O60706 1549 aa26.22■■□□□ 1.79
PPP1R3E-201ENST00000452015 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
PPP1R3E-201ENST00000452015 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
PPP1R3E-201ENST00000452015 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.746e-6■■□□□ 12.8
PPP1R3E-201ENST00000452015 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
PPP1R3E-201ENST00000452015 PPARGC1BQ86YN6 1023 aaKnown RBP25.76■■□□□ 1.71
PPP1R3E-201ENST00000452015 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
PPP1R3E-201ENST00000452015 CCER1Q8TC90 406 aaPredicted RBP25.68■■□□□ 1.7
PPP1R3E-201ENST00000452015 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
PPP1R3E-201ENST00000452015 TRIM26Q12899 539 aaPredicted RBP25.34■■□□□ 1.65
PPP1R3E-201ENST00000452015 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
PPP1R3E-201ENST00000452015 ITGAEP38570 1179 aa25.2■■□□□ 1.62
PPP1R3E-201ENST00000452015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.19■■□□□ 1.62
PPP1R3E-201ENST00000452015 HNRNPUL2Q1KMD3 747 aaKnown RBP25.19■■□□□ 1.62
PPP1R3E-201ENST00000452015 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
PPP1R3E-201ENST00000452015 SCRIBQ14160 1630 aa25.08■■□□□ 1.61
PPP1R3E-201ENST00000452015 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
PPP1R3E-201ENST00000452015 CENPBP07199 599 aaPredicted RBP24.91■■□□□ 1.58
PPP1R3E-201ENST00000452015 HRCP23327 699 aa24.87■■□□□ 1.57
PPP1R3E-201ENST00000452015 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
PPP1R3E-201ENST00000452015 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
PPP1R3E-201ENST00000452015 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
PPP1R3E-201ENST00000452015 FBLN2P98095 1184 aa24.65■■□□□ 1.54
PPP1R3E-201ENST00000452015 FAM50AQ14320 339 aaKnown RBP24.63■■□□□ 1.53
PPP1R3E-201ENST00000452015 POLR3GLQ9BT43 218 aa24.52■■□□□ 1.52
PPP1R3E-201ENST00000452015 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
PPP1R3E-201ENST00000452015 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
PPP1R3E-201ENST00000452015 ARID3CA6NKF2 412 aa24.37■■□□□ 1.49
PPP1R3E-201ENST00000452015 NEFLP07196 543 aa24.36■■□□□ 1.49
PPP1R3E-201ENST00000452015 CNGB1Q14028 1251 aaPredicted RBP24.36■■□□□ 1.49
PPP1R3E-201ENST00000452015 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
PPP1R3E-201ENST00000452015 NACADO15069 1562 aa24.35■■□□□ 1.49
PPP1R3E-201ENST00000452015 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
PPP1R3E-201ENST00000452015 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
PPP1R3E-201ENST00000452015 DIEXFQ68CQ4 756 aaKnown RBP24.15■■□□□ 1.46
PPP1R3E-201ENST00000452015 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
PPP1R3E-201ENST00000452015 CECR2Q9BXF3 1484 aa24.05■■□□□ 1.44
PPP1R3E-201ENST00000452015 ERICH6Q7L0X2 663 aa24.03■■□□□ 1.44
PPP1R3E-201ENST00000452015 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
PPP1R3E-201ENST00000452015 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
PPP1R3E-201ENST00000452015 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
PPP1R3E-201ENST00000452015 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
PPP1R3E-201ENST00000452015 MYT1Q01538 1121 aa23.96■■□□□ 1.43
PPP1R3E-201ENST00000452015 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
PPP1R3E-201ENST00000452015 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
PPP1R3E-201ENST00000452015 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
PPP1R3E-201ENST00000452015 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
PPP1R3E-201ENST00000452015 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
PPP1R3E-201ENST00000452015 CLIP1P30622 1438 aa23.78■■□□□ 1.4
PPP1R3E-201ENST00000452015 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
PPP1R3E-201ENST00000452015 EEA1Q15075 1411 aa23.7■■□□□ 1.38
PPP1R3E-201ENST00000452015 CHIC2Q9UKJ5 165 aa23.69■■□□□ 1.38
PPP1R3E-201ENST00000452015 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
PPP1R3E-201ENST00000452015 ANP32CO43423 234 aa23.66■■□□□ 1.38
PPP1R3E-201ENST00000452015 GOLGA3Q08378 1498 aa23.64■■□□□ 1.37
PPP1R3E-201ENST00000452015 MTUS2Q5JR59 1369 aa23.64■■□□□ 1.37
PPP1R3E-201ENST00000452015 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
PPP1R3E-201ENST00000452015 NPM1P06748 294 aaKnown RBP eCLIP23.62■■□□□ 1.37
PPP1R3E-201ENST00000452015 KIF27Q86VH2 1401 aa23.6■■□□□ 1.37
PPP1R3E-201ENST00000452015 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
PPP1R3E-201ENST00000452015 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
PPP1R3E-201ENST00000452015 TNIKQ9UKE5 1360 aa23.49■■□□□ 1.35
PPP1R3E-201ENST00000452015 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
PPP1R3E-201ENST00000452015 BCANQ96GW7 911 aa23.47■■□□□ 1.35
PPP1R3E-201ENST00000452015 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
PPP1R3E-201ENST00000452015 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
PPP1R3E-201ENST00000452015 SOGA1O94964 1423 aa23.45■■□□□ 1.35
PPP1R3E-201ENST00000452015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.347e-7■□□□□ 10.9
PPP1R3E-201ENST00000452015 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
PPP1R3E-201ENST00000452015 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
PPP1R3E-201ENST00000452015 KCNH8Q96L42 1107 aa23.39■■□□□ 1.33
PPP1R3E-201ENST00000452015 RRP7BPQ9NSQ0 103 aa23.37■■□□□ 1.33
PPP1R3E-201ENST00000452015 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
PPP1R3E-201ENST00000452015 GTF3C3Q9Y5Q9 886 aa23.36■■□□□ 1.33
PPP1R3E-201ENST00000452015 PLEKHD1A6NEE1 506 aa23.35■■□□□ 1.33
PPP1R3E-201ENST00000452015 DAXXQ9UER7 740 aaPredicted RBP23.35■■□□□ 1.33
PPP1R3E-201ENST00000452015 CUX2O14529 1486 aa23.33■■□□□ 1.33
PPP1R3E-201ENST00000452015 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
PPP1R3E-201ENST00000452015 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
PPP1R3E-201ENST00000452015 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
PPP1R3E-201ENST00000452015 WIZO95785 1651 aa23.3■■□□□ 1.32
PPP1R3E-201ENST00000452015 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
PPP1R3E-201ENST00000452015 PLPPR3Q6T4P5 718 aa23.28■■□□□ 1.32
PPP1R3E-201ENST00000452015 STAG3Q9UJ98 1225 aa23.27■■□□□ 1.32
PPP1R3E-201ENST00000452015 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
PPP1R3E-201ENST00000452015 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
PPP1R3E-201ENST00000452015 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
PPP1R3E-201ENST00000452015 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
PPP1R3E-201ENST00000452015 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms