RNA–Protein interactions for RNA: ENST00000007708.7

PDK2-201, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 2 BASIC

Gene PDK2, Length 2,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-201ENST00000007708 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
PDK2-201ENST00000007708 CCDC180Q9P1Z9 1646 aa29.3■■■□□ 2.28
PDK2-201ENST00000007708 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
PDK2-201ENST00000007708 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
PDK2-201ENST00000007708 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
PDK2-201ENST00000007708 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
PDK2-201ENST00000007708 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
PDK2-201ENST00000007708 MYO15BQ96JP2 1530 aa27.47■■□□□ 1.99
PDK2-201ENST00000007708 ABCC9O60706 1549 aa27.4■■□□□ 1.98
PDK2-201ENST00000007708 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
PDK2-201ENST00000007708 NACADO15069 1562 aa27.19■■□□□ 1.94
PDK2-201ENST00000007708 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
PDK2-201ENST00000007708 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
PDK2-201ENST00000007708 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
PDK2-201ENST00000007708 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
PDK2-201ENST00000007708 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
PDK2-201ENST00000007708 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
PDK2-201ENST00000007708 WIZO95785 1651 aa26.29■■□□□ 1.8
PDK2-201ENST00000007708 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
PDK2-201ENST00000007708 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
PDK2-201ENST00000007708 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
PDK2-201ENST00000007708 PABPN1Q86U42 306 aaKnown RBP eCLIP26.07■■□□□ 1.76
PDK2-201ENST00000007708 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
PDK2-201ENST00000007708 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
PDK2-201ENST00000007708 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
PDK2-201ENST00000007708 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
PDK2-201ENST00000007708 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
PDK2-201ENST00000007708 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
PDK2-201ENST00000007708 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.7
PDK2-201ENST00000007708 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
PDK2-201ENST00000007708 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
PDK2-201ENST00000007708 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
PDK2-201ENST00000007708 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
PDK2-201ENST00000007708 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
PDK2-201ENST00000007708 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
PDK2-201ENST00000007708 HRCP23327 699 aa25.23■■□□□ 1.63
PDK2-201ENST00000007708 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
PDK2-201ENST00000007708 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
PDK2-201ENST00000007708 SOGA1O94964 1423 aa25.18■■□□□ 1.62
PDK2-201ENST00000007708 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
PDK2-201ENST00000007708 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
PDK2-201ENST00000007708 EEA1Q15075 1411 aa25.08■■□□□ 1.61
PDK2-201ENST00000007708 SYNJ1O43426 1573 aa25.08■■□□□ 1.6
PDK2-201ENST00000007708 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
PDK2-201ENST00000007708 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
PDK2-201ENST00000007708 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
PDK2-201ENST00000007708 CEP162Q5TB80 1403 aa24.87■■□□□ 1.57
PDK2-201ENST00000007708 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
PDK2-201ENST00000007708 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
PDK2-201ENST00000007708 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
PDK2-201ENST00000007708 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
PDK2-201ENST00000007708 CFTRP13569 1480 aa24.8■■□□□ 1.56
PDK2-201ENST00000007708 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
PDK2-201ENST00000007708 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
PDK2-201ENST00000007708 KIF21BO75037 1637 aa24.73■■□□□ 1.55
PDK2-201ENST00000007708 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
PDK2-201ENST00000007708 CUX1P39880 1505 aa24.69■■□□□ 1.54
PDK2-201ENST00000007708 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
PDK2-201ENST00000007708 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
PDK2-201ENST00000007708 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
PDK2-201ENST00000007708 CLIP1P30622 1438 aa24.52■■□□□ 1.52
PDK2-201ENST00000007708 TTBK1Q5TCY1 1321 aaPredicted RBP24.49■■□□□ 1.51
PDK2-201ENST00000007708 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
PDK2-201ENST00000007708 KIF27Q86VH2 1401 aa24.47■■□□□ 1.51
PDK2-201ENST00000007708 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
PDK2-201ENST00000007708 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
PDK2-201ENST00000007708 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
PDK2-201ENST00000007708 VPS8Q8N3P4 1428 aa24.36■■□□□ 1.49
PDK2-201ENST00000007708 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
PDK2-201ENST00000007708 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
PDK2-201ENST00000007708 CUX2O14529 1486 aa24.31■■□□□ 1.48
PDK2-201ENST00000007708 NESP48681 1621 aa24.28■■□□□ 1.48
PDK2-201ENST00000007708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
PDK2-201ENST00000007708 IGF1RP08069 1367 aa24.23■■□□□ 1.47
PDK2-201ENST00000007708 APLP2Q06481 763 aa24.19■■□□□ 1.46
PDK2-201ENST00000007708 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
PDK2-201ENST00000007708 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
PDK2-201ENST00000007708 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
PDK2-201ENST00000007708 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
PDK2-201ENST00000007708 LAMC3Q9Y6N6 1575 aa24.14■■□□□ 1.46
PDK2-201ENST00000007708 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
PDK2-201ENST00000007708 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
PDK2-201ENST00000007708 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
PDK2-201ENST00000007708 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
PDK2-201ENST00000007708 ARHGAP35Q9NRY4 1499 aa24.06■■□□□ 1.44
PDK2-201ENST00000007708 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
PDK2-201ENST00000007708 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
PDK2-201ENST00000007708 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
PDK2-201ENST00000007708 HNRNPUL2Q1KMD3 747 aaKnown RBP23.96■■□□□ 1.43
PDK2-201ENST00000007708 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
PDK2-201ENST00000007708 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
PDK2-201ENST00000007708 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
PDK2-201ENST00000007708 CUL7Q14999 1698 aa23.85■■□□□ 1.41
PDK2-201ENST00000007708 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.41
PDK2-201ENST00000007708 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
PDK2-201ENST00000007708 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
PDK2-201ENST00000007708 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
PDK2-201ENST00000007708 RRBP1Q9P2E9 1410 aaKnown RBP23.73■■□□□ 1.39
PDK2-201ENST00000007708 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
PDK2-201ENST00000007708 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms