RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
PXN-201ENST00000228307 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
PXN-201ENST00000228307 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
PXN-201ENST00000228307 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
PXN-201ENST00000228307 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
PXN-201ENST00000228307 ABCC9O60706 1549 aa25.63■■□□□ 1.69
PXN-201ENST00000228307 EHMT2Q96KQ7 1210 aa25.62■■□□□ 1.69
PXN-201ENST00000228307 HRCP23327 699 aa25.51■■□□□ 1.67
PXN-201ENST00000228307 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
PXN-201ENST00000228307 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
PXN-201ENST00000228307 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
PXN-201ENST00000228307 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
PXN-201ENST00000228307 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
PXN-201ENST00000228307 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
PXN-201ENST00000228307 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
PXN-201ENST00000228307 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
PXN-201ENST00000228307 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
PXN-201ENST00000228307 TRIM26Q12899 539 aaPredicted RBP24.71■■□□□ 1.55
PXN-201ENST00000228307 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
PXN-201ENST00000228307 TTBK1Q5TCY1 1321 aaPredicted RBP24.55■■□□□ 1.52
PXN-201ENST00000228307 ZEB1P37275 1124 aaPredicted RBP24.54■■□□□ 1.52
PXN-201ENST00000228307 PELP1Q8IZL8 1130 aaKnown RBP24.41■■□□□ 1.5
PXN-201ENST00000228307 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.49
PXN-201ENST00000228307 CCER1Q8TC90 406 aaPredicted RBP24.3■■□□□ 1.48
PXN-201ENST00000228307 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
PXN-201ENST00000228307 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
PXN-201ENST00000228307 RSF1Q96T23 1441 aaPredicted RBP24.26■■□□□ 1.47
PXN-201ENST00000228307 NACADO15069 1562 aa24.07■■□□□ 1.44
PXN-201ENST00000228307 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
PXN-201ENST00000228307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
PXN-201ENST00000228307 UBTFP17480 764 aaKnown RBP24.03■■□□□ 1.44
PXN-201ENST00000228307 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
PXN-201ENST00000228307 YTHDC1Q96MU7 727 aaKnown RBP23.96■■□□□ 1.43
PXN-201ENST00000228307 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
PXN-201ENST00000228307 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.42
PXN-201ENST00000228307 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
PXN-201ENST00000228307 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
PXN-201ENST00000228307 WIZO95785 1651 aa23.68■■□□□ 1.38
PXN-201ENST00000228307 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
PXN-201ENST00000228307 NEUROD1Q13562 356 aa23.59■■□□□ 1.37
PXN-201ENST00000228307 APLP2Q06481 763 aa23.56■■□□□ 1.36
PXN-201ENST00000228307 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
PXN-201ENST00000228307 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
PXN-201ENST00000228307 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
PXN-201ENST00000228307 MYT1Q01538 1121 aa23.43■■□□□ 1.34
PXN-201ENST00000228307 CSRNP3Q8WYN3 585 aa23.4■■□□□ 1.34
PXN-201ENST00000228307 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
PXN-201ENST00000228307 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
PXN-201ENST00000228307 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
PXN-201ENST00000228307 SOGA1O94964 1423 aa23.24■■□□□ 1.31
PXN-201ENST00000228307 ZNF316A6NFI3 1004 aaPredicted RBP23.23■■□□□ 1.31
PXN-201ENST00000228307 ITGAEP38570 1179 aa23.21■■□□□ 1.31
PXN-201ENST00000228307 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
PXN-201ENST00000228307 P3H3Q8IVL6 736 aa23.11■■□□□ 1.29
PXN-201ENST00000228307 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.29
PXN-201ENST00000228307 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
PXN-201ENST00000228307 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
PXN-201ENST00000228307 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
PXN-201ENST00000228307 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
PXN-201ENST00000228307 MIER1Q8N108 512 aa22.98■■□□□ 1.27
PXN-201ENST00000228307 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
PXN-201ENST00000228307 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
PXN-201ENST00000228307 CEP162Q5TB80 1403 aa22.88■■□□□ 1.25
PXN-201ENST00000228307 ARID3CA6NKF2 412 aa22.86■■□□□ 1.25
PXN-201ENST00000228307 BCANQ96GW7 911 aa22.79■■□□□ 1.24
PXN-201ENST00000228307 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
PXN-201ENST00000228307 NEFLP07196 543 aa22.72■■□□□ 1.23
PXN-201ENST00000228307 CLIP1P30622 1438 aa22.71■■□□□ 1.23
PXN-201ENST00000228307 FBLN2P98095 1184 aa22.7■■□□□ 1.22
PXN-201ENST00000228307 GOLGA3Q08378 1498 aa22.66■■□□□ 1.22
PXN-201ENST00000228307 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
PXN-201ENST00000228307 TNIKQ9UKE5 1360 aa22.66■■□□□ 1.22
PXN-201ENST00000228307 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
PXN-201ENST00000228307 ERICH6Q7L0X2 663 aa22.57■■□□□ 1.2
PXN-201ENST00000228307 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
PXN-201ENST00000228307 EEA1Q15075 1411 aa22.55■■□□□ 1.2
PXN-201ENST00000228307 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
PXN-201ENST00000228307 CUX2O14529 1486 aa22.51■■□□□ 1.19
PXN-201ENST00000228307 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
PXN-201ENST00000228307 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
PXN-201ENST00000228307 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
PXN-201ENST00000228307 KANK4Q5T7N3 995 aaPredicted RBP22.45■■□□□ 1.18
PXN-201ENST00000228307 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
PXN-201ENST00000228307 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
PXN-201ENST00000228307 NESP48681 1621 aa22.39■■□□□ 1.18
PXN-201ENST00000228307 FKBP8Q14318 412 aa22.38■■□□□ 1.17
PXN-201ENST00000228307 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
PXN-201ENST00000228307 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
PXN-201ENST00000228307 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
PXN-201ENST00000228307 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
PXN-201ENST00000228307 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
PXN-201ENST00000228307 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
PXN-201ENST00000228307 HIRIP3Q9BW71 556 aaPredicted RBP22.24■■□□□ 1.15
PXN-201ENST00000228307 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
PXN-201ENST00000228307 CLSPNQ9HAW4 1339 aa22.24■■□□□ 1.15
PXN-201ENST00000228307 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
PXN-201ENST00000228307 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
PXN-201ENST00000228307 CFTRP13569 1480 aa22.21■■□□□ 1.15
PXN-201ENST00000228307 CUX1P39880 1505 aa22.2■■□□□ 1.14
PXN-201ENST00000228307 CHIC2Q9UKJ5 165 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms