RNA–Protein interactions for RNA: ENST00000246015.8

PSMF1-201, Transcript of proteasome inhibitor subunit 1, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene PSMF1, Length 2,042 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-201ENST00000246015 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
PSMF1-201ENST00000246015 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
PSMF1-201ENST00000246015 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
PSMF1-201ENST00000246015 ABCC9O60706 1549 aa31■■■□□ 2.55
PSMF1-201ENST00000246015 DCAF8L2P0C7V8 631 aa30.85■■■□□ 2.53
PSMF1-201ENST00000246015 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
PSMF1-201ENST00000246015 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.45
PSMF1-201ENST00000246015 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
PSMF1-201ENST00000246015 NACADO15069 1562 aa30.24■■■□□ 2.43
PSMF1-201ENST00000246015 RB1CC1Q8TDY2 1594 aa30.05■■■□□ 2.4
PSMF1-201ENST00000246015 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
PSMF1-201ENST00000246015 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
PSMF1-201ENST00000246015 BICRAQ9NZM4 1560 aa29.28■■■□□ 2.28
PSMF1-201ENST00000246015 PABPN1Q86U42 306 aaKnown RBP eCLIP29.23■■■□□ 2.27
PSMF1-201ENST00000246015 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
PSMF1-201ENST00000246015 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
PSMF1-201ENST00000246015 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
PSMF1-201ENST00000246015 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
PSMF1-201ENST00000246015 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
PSMF1-201ENST00000246015 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
PSMF1-201ENST00000246015 WIZO95785 1651 aa28.6■■■□□ 2.17
PSMF1-201ENST00000246015 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
PSMF1-201ENST00000246015 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
PSMF1-201ENST00000246015 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
PSMF1-201ENST00000246015 TOP2AP11388 1531 aaKnown RBP28.17■■■□□ 2.1
PSMF1-201ENST00000246015 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
PSMF1-201ENST00000246015 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
PSMF1-201ENST00000246015 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
PSMF1-201ENST00000246015 CCDC88BA6NC98 1476 aa27.94■■■□□ 2.06
PSMF1-201ENST00000246015 NCAPD3P42695 1498 aa27.94■■■□□ 2.06
PSMF1-201ENST00000246015 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
PSMF1-201ENST00000246015 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.03
PSMF1-201ENST00000246015 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
PSMF1-201ENST00000246015 ABCC8Q09428 1581 aa27.38■■□□□ 1.97
PSMF1-201ENST00000246015 CFTRP13569 1480 aa27.29■■□□□ 1.96
PSMF1-201ENST00000246015 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
PSMF1-201ENST00000246015 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
PSMF1-201ENST00000246015 NESP48681 1621 aa27.21■■□□□ 1.95
PSMF1-201ENST00000246015 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
PSMF1-201ENST00000246015 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
PSMF1-201ENST00000246015 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
PSMF1-201ENST00000246015 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
PSMF1-201ENST00000246015 FANCD2Q9BXW9 1451 aa26.96■■□□□ 1.91
PSMF1-201ENST00000246015 CUX1P39880 1505 aa26.94■■□□□ 1.9
PSMF1-201ENST00000246015 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
PSMF1-201ENST00000246015 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
PSMF1-201ENST00000246015 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
PSMF1-201ENST00000246015 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
PSMF1-201ENST00000246015 SOGA1O94964 1423 aa26.8■■□□□ 1.88
PSMF1-201ENST00000246015 CEP164Q9UPV0 1460 aa26.78■■□□□ 1.88
PSMF1-201ENST00000246015 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
PSMF1-201ENST00000246015 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
PSMF1-201ENST00000246015 LOC105371045A0A1W2PR82 267 aa26.73■■□□□ 1.87
PSMF1-201ENST00000246015 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
PSMF1-201ENST00000246015 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
PSMF1-201ENST00000246015 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
PSMF1-201ENST00000246015 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
PSMF1-201ENST00000246015 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
PSMF1-201ENST00000246015 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
PSMF1-201ENST00000246015 RAD54L2Q9Y4B4 1467 aa26.51■■□□□ 1.83
PSMF1-201ENST00000246015 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
PSMF1-201ENST00000246015 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
PSMF1-201ENST00000246015 EEA1Q15075 1411 aa26.48■■□□□ 1.83
PSMF1-201ENST00000246015 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
PSMF1-201ENST00000246015 CUX2O14529 1486 aa26.42■■□□□ 1.82
PSMF1-201ENST00000246015 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
PSMF1-201ENST00000246015 WDR62O43379 1518 aa26.39■■□□□ 1.81
PSMF1-201ENST00000246015 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
PSMF1-201ENST00000246015 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
PSMF1-201ENST00000246015 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
PSMF1-201ENST00000246015 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
PSMF1-201ENST00000246015 KIF21BO75037 1637 aa26.26■■□□□ 1.79
PSMF1-201ENST00000246015 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
PSMF1-201ENST00000246015 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
PSMF1-201ENST00000246015 IGF1RP08069 1367 aa26.22■■□□□ 1.79
PSMF1-201ENST00000246015 GOLGA3Q08378 1498 aa26.2■■□□□ 1.78
PSMF1-201ENST00000246015 PRXQ9BXM0 1461 aa26.2■■□□□ 1.78
PSMF1-201ENST00000246015 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
PSMF1-201ENST00000246015 ZNF608Q9ULD9 1512 aaPredicted RBP26.14■■□□□ 1.77
PSMF1-201ENST00000246015 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
PSMF1-201ENST00000246015 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.771e-6■■■■■ 27.8
PSMF1-201ENST00000246015 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
PSMF1-201ENST00000246015 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
PSMF1-201ENST00000246015 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
PSMF1-201ENST00000246015 TNIKQ9UKE5 1360 aa26.08■■□□□ 1.77
PSMF1-201ENST00000246015 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
PSMF1-201ENST00000246015 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
PSMF1-201ENST00000246015 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
PSMF1-201ENST00000246015 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
PSMF1-201ENST00000246015 CUL7Q14999 1698 aa25.99■■□□□ 1.75
PSMF1-201ENST00000246015 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
PSMF1-201ENST00000246015 GRIN2BQ13224 1484 aa25.9■■□□□ 1.74
PSMF1-201ENST00000246015 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
PSMF1-201ENST00000246015 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
PSMF1-201ENST00000246015 CLIP1P30622 1438 aa25.81■■□□□ 1.72
PSMF1-201ENST00000246015 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
PSMF1-201ENST00000246015 CTTNBP2Q8WZ74 1663 aa25.74■■□□□ 1.71
PSMF1-201ENST00000246015 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
PSMF1-201ENST00000246015 ARHGAP35Q9NRY4 1499 aa25.66■■□□□ 1.7
PSMF1-201ENST00000246015 ARAP1Q96P48 1450 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms