RNA–Protein interactions for RNA: ENST00000378357.8

CA9-201, Transcript of carbonic anhydrase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CA9, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA9-201ENST00000378357 NISCHQ9Y2I1 1504 aa44.18■■■■■ 4.66
CA9-201ENST00000378357 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
CA9-201ENST00000378357 ABCC9O60706 1549 aa39.49■■■■□ 3.91
CA9-201ENST00000378357 RB1CC1Q8TDY2 1594 aa37.65■■■■□ 3.62
CA9-201ENST00000378357 NACADO15069 1562 aa37.42■■■■□ 3.58
CA9-201ENST00000378357 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
CA9-201ENST00000378357 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
CA9-201ENST00000378357 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
CA9-201ENST00000378357 MYO15BQ96JP2 1530 aa36.95■■■■□ 3.5
CA9-201ENST00000378357 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
CA9-201ENST00000378357 ZCCHC6Q5VYS8 1495 aaKnown RBP36.66■■■■□ 3.46
CA9-201ENST00000378357 BICRAQ9NZM4 1560 aa36.65■■■■□ 3.46
CA9-201ENST00000378357 DCAF1Q9Y4B6 1507 aa36.52■■■■□ 3.44
CA9-201ENST00000378357 SCRIBQ14160 1630 aa36.12■■■■□ 3.37
CA9-201ENST00000378357 SHROOM4Q9ULL8 1493 aa36.07■■■■□ 3.37
CA9-201ENST00000378357 CC2D2AQ9P2K1 1620 aa35.74■■■■□ 3.31
CA9-201ENST00000378357 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
CA9-201ENST00000378357 CECR2Q9BXF3 1484 aa35.55■■■■□ 3.28
CA9-201ENST00000378357 NCAPD3P42695 1498 aa34.52■■■■□ 3.12
CA9-201ENST00000378357 SMARCA4P51532 1647 aa34.49■■■■□ 3.11
CA9-201ENST00000378357 ATAD2BQ9ULI0 1458 aa34.45■■■■□ 3.1
CA9-201ENST00000378357 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
CA9-201ENST00000378357 HMGXB3Q12766 1538 aa34.33■■■■□ 3.09
CA9-201ENST00000378357 BAZ1AQ9NRL2 1556 aaPredicted RBP34.28■■■■□ 3.08
CA9-201ENST00000378357 PEG3Q9GZU2 1588 aa34.17■■■■□ 3.06
CA9-201ENST00000378357 BAZ1BQ9UIG0 1483 aaKnown RBP34.09■■■■□ 3.05
CA9-201ENST00000378357 MROH2BQ7Z745 1585 aa34.06■■■■□ 3.04
CA9-201ENST00000378357 ERCC6Q03468 1493 aa34.03■■■■□ 3.04
CA9-201ENST00000378357 CUX2O14529 1486 aa34■■■■□ 3.03
CA9-201ENST00000378357 NESP48681 1621 aa33.99■■■■□ 3.03
CA9-201ENST00000378357 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3
CA9-201ENST00000378357 LAMC3Q9Y6N6 1575 aa33.77■■■■□ 3
CA9-201ENST00000378357 THOC2Q8NI27 1593 aaKnown RBP33.7■■■□□ 2.99
CA9-201ENST00000378357 WIZO95785 1651 aa33.7■■■□□ 2.98
CA9-201ENST00000378357 KIF21AQ7Z4S6 1674 aa33.64■■■□□ 2.98
CA9-201ENST00000378357 PDS5BQ9NTI5 1447 aa33.47■■■□□ 2.95
CA9-201ENST00000378357 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
CA9-201ENST00000378357 RSF1Q96T23 1441 aaPredicted RBP33.35■■■□□ 2.93
CA9-201ENST00000378357 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
CA9-201ENST00000378357 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
CA9-201ENST00000378357 WDR62O43379 1518 aa33.21■■■□□ 2.91
CA9-201ENST00000378357 CFTRP13569 1480 aa33.12■■■□□ 2.89
CA9-201ENST00000378357 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
CA9-201ENST00000378357 FANCD2Q9BXW9 1451 aa33.09■■■□□ 2.89
CA9-201ENST00000378357 PRDM2Q13029 1718 aa32.96■■■□□ 2.87
CA9-201ENST00000378357 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
CA9-201ENST00000378357 CCDC88BA6NC98 1476 aa32.83■■■□□ 2.85
CA9-201ENST00000378357 TOPBP1Q92547 1522 aa32.5■■■□□ 2.79
CA9-201ENST00000378357 IFT140Q96RY7 1462 aa32.45■■■□□ 2.78
CA9-201ENST00000378357 ZNF608Q9ULD9 1512 aaPredicted RBP32.43■■■□□ 2.78
CA9-201ENST00000378357 DNMBPQ6XZF7 1577 aa32.41■■■□□ 2.78
CA9-201ENST00000378357 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
CA9-201ENST00000378357 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
CA9-201ENST00000378357 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
CA9-201ENST00000378357 EIF4G3O43432 1585 aaKnown RBP32.3■■■□□ 2.76
CA9-201ENST00000378357 TARBP1Q13395 1621 aaKnown RBP32.28■■■□□ 2.76
CA9-201ENST00000378357 POLA1P09884 1462 aaPredicted RBP32.18■■■□□ 2.74
CA9-201ENST00000378357 RIMBP3CA6NJZ7 1639 aa32.1■■■□□ 2.73
CA9-201ENST00000378357 RIMBP3BA6NNM3 1639 aa32.1■■■□□ 2.73
CA9-201ENST00000378357 RIMBP3Q9UFD9 1639 aa32.1■■■□□ 2.73
CA9-201ENST00000378357 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.73
CA9-201ENST00000378357 CHD1O14646 1710 aa32.09■■■□□ 2.73
CA9-201ENST00000378357 RAD54L2Q9Y4B4 1467 aa32.05■■■□□ 2.72
CA9-201ENST00000378357 CUX1P39880 1505 aa32.01■■■□□ 2.71
CA9-201ENST00000378357 FGD5Q6ZNL6 1462 aa31.99■■■□□ 2.71
CA9-201ENST00000378357 ARHGEF11O15085 1522 aa31.97■■■□□ 2.71
CA9-201ENST00000378357 SOGA1O94964 1423 aa31.96■■■□□ 2.71
CA9-201ENST00000378357 WDR97A6NE52 1622 aa31.91■■■□□ 2.7
CA9-201ENST00000378357 TDRD9Q8NDG6 1382 aaKnown RBP31.89■■■□□ 2.7
CA9-201ENST00000378357 SNAPC4Q5SXM2 1469 aa31.81■■■□□ 2.68
CA9-201ENST00000378357 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
CA9-201ENST00000378357 FBLN2P98095 1184 aa31.75■■■□□ 2.67
CA9-201ENST00000378357 PBRM1Q86U86 1689 aa31.72■■■□□ 2.67
CA9-201ENST00000378357 MAGI1Q96QZ7 1491 aaPredicted RBP31.71■■■□□ 2.67
CA9-201ENST00000378357 GRIN2BQ13224 1484 aa31.7■■■□□ 2.67
CA9-201ENST00000378357 CLASP1Q7Z460 1538 aa31.69■■■□□ 2.66
CA9-201ENST00000378357 ARAP1Q96P48 1450 aa31.68■■■□□ 2.66
CA9-201ENST00000378357 ABCA5Q8WWZ7 1642 aa31.64■■■□□ 2.66
CA9-201ENST00000378357 ABCA10Q8WWZ4 1543 aa31.63■■■□□ 2.65
CA9-201ENST00000378357 SYNJ1O43426 1573 aa31.61■■■□□ 2.65
CA9-201ENST00000378357 GAPVD1Q14C86 1478 aa31.61■■■□□ 2.65
CA9-201ENST00000378357 SYNJ2O15056 1496 aa31.6■■■□□ 2.65
CA9-201ENST00000378357 CYB5RLQ6IPT4 315 aa31.59■■■□□ 2.65
CA9-201ENST00000378357 BIVM-ERCC5R4GMW8 1640 aa31.56■■■□□ 2.64
CA9-201ENST00000378357 CHMP7Q8WUX9 453 aaPredicted RBP31.54■■■□□ 2.64
CA9-201ENST00000378357 TOP2BQ02880 1626 aa31.52■■■□□ 2.64
CA9-201ENST00000378357 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
CA9-201ENST00000378357 ADAMTS12P58397 1594 aa31.39■■■□□ 2.62
CA9-201ENST00000378357 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
CA9-201ENST00000378357 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
CA9-201ENST00000378357 NUP160Q12769 1436 aa31.23■■■□□ 2.59
CA9-201ENST00000378357 ERICH3Q5RHP9 1530 aa31.23■■■□□ 2.59
CA9-201ENST00000378357 ERCC6L2Q5T890 1561 aa31.21■■■□□ 2.59
CA9-201ENST00000378357 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.58
CA9-201ENST00000378357 TRHP20396 242 aaPredicted RBP31.16■■■□□ 2.58
CA9-201ENST00000378357 SHROOM2Q13796 1616 aa31.15■■■□□ 2.58
CA9-201ENST00000378357 RUSC2Q8N2Y8 1516 aa30.95■■■□□ 2.55
CA9-201ENST00000378357 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
CA9-201ENST00000378357 CUL7Q14999 1698 aa30.83■■■□□ 2.53
CA9-201ENST00000378357 IGF1RP08069 1367 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms