RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
LRP8-202ENST00000347547 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
LRP8-202ENST00000347547 HRCP23327 699 aa26.51■■□□□ 1.83
LRP8-202ENST00000347547 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
LRP8-202ENST00000347547 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
LRP8-202ENST00000347547 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
LRP8-202ENST00000347547 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
LRP8-202ENST00000347547 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
LRP8-202ENST00000347547 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
LRP8-202ENST00000347547 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.71
LRP8-202ENST00000347547 PELP1Q8IZL8 1130 aaKnown RBP25.67■■□□□ 1.7
LRP8-202ENST00000347547 PPARGC1BQ86YN6 1023 aaKnown RBP25.66■■□□□ 1.7
LRP8-202ENST00000347547 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
LRP8-202ENST00000347547 ABCC9O60706 1549 aa25.3■■□□□ 1.64
LRP8-202ENST00000347547 TRIM26Q12899 539 aaPredicted RBP25.18■■□□□ 1.62
LRP8-202ENST00000347547 ZEB1P37275 1124 aaPredicted RBP25.09■■□□□ 1.61
LRP8-202ENST00000347547 NACADO15069 1562 aa25.08■■□□□ 1.61
LRP8-202ENST00000347547 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
LRP8-202ENST00000347547 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
LRP8-202ENST00000347547 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
LRP8-202ENST00000347547 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
LRP8-202ENST00000347547 MYT1Q01538 1121 aa24.73■■□□□ 1.55
LRP8-202ENST00000347547 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
LRP8-202ENST00000347547 ACIN1Q9UKV3 1341 aaKnown RBP24.42■■□□□ 1.5
LRP8-202ENST00000347547 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
LRP8-202ENST00000347547 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
LRP8-202ENST00000347547 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
LRP8-202ENST00000347547 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.46
LRP8-202ENST00000347547 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.46
LRP8-202ENST00000347547 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
LRP8-202ENST00000347547 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
LRP8-202ENST00000347547 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.43
LRP8-202ENST00000347547 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
LRP8-202ENST00000347547 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
LRP8-202ENST00000347547 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
LRP8-202ENST00000347547 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.42
LRP8-202ENST00000347547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
LRP8-202ENST00000347547 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
LRP8-202ENST00000347547 WIZO95785 1651 aa23.85■■□□□ 1.41
LRP8-202ENST00000347547 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
LRP8-202ENST00000347547 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
LRP8-202ENST00000347547 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
LRP8-202ENST00000347547 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
LRP8-202ENST00000347547 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
LRP8-202ENST00000347547 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
LRP8-202ENST00000347547 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
LRP8-202ENST00000347547 SMARCA2P51531 1590 aa23.39■■□□□ 1.34
LRP8-202ENST00000347547 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
LRP8-202ENST00000347547 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
LRP8-202ENST00000347547 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
LRP8-202ENST00000347547 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.33
LRP8-202ENST00000347547 MIER1Q8N108 512 aa23.33■■□□□ 1.32
LRP8-202ENST00000347547 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
LRP8-202ENST00000347547 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
LRP8-202ENST00000347547 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
LRP8-202ENST00000347547 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
LRP8-202ENST00000347547 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
LRP8-202ENST00000347547 EEA1Q15075 1411 aa23.15■■□□□ 1.3
LRP8-202ENST00000347547 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
LRP8-202ENST00000347547 SUPT16HQ9Y5B9 1047 aaKnown RBP23.04■■□□□ 1.28
LRP8-202ENST00000347547 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
LRP8-202ENST00000347547 ANP32EQ9BTT0 268 aa23■■□□□ 1.27
LRP8-202ENST00000347547 SOGA1O94964 1423 aa22.99■■□□□ 1.27
LRP8-202ENST00000347547 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
LRP8-202ENST00000347547 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
LRP8-202ENST00000347547 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
LRP8-202ENST00000347547 TSHZ2Q9NRE2 1034 aa22.93■■□□□ 1.26
LRP8-202ENST00000347547 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
LRP8-202ENST00000347547 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
LRP8-202ENST00000347547 BCL11AQ9H165 835 aa22.83■■□□□ 1.24
LRP8-202ENST00000347547 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
LRP8-202ENST00000347547 KIF21BO75037 1637 aa22.78■■□□□ 1.24
LRP8-202ENST00000347547 VPS8Q8N3P4 1428 aa22.77■■□□□ 1.24
LRP8-202ENST00000347547 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
LRP8-202ENST00000347547 CLIP1P30622 1438 aa22.71■■□□□ 1.23
LRP8-202ENST00000347547 PRDM2Q13029 1718 aa22.7■■□□□ 1.23
LRP8-202ENST00000347547 CFTRP13569 1480 aa22.69■■□□□ 1.22
LRP8-202ENST00000347547 DHX57Q6P158 1386 aaKnown RBP22.68■■□□□ 1.22
LRP8-202ENST00000347547 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
LRP8-202ENST00000347547 APLP2Q06481 763 aa22.57■■□□□ 1.2
LRP8-202ENST00000347547 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
LRP8-202ENST00000347547 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
LRP8-202ENST00000347547 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.19
LRP8-202ENST00000347547 CUX2O14529 1486 aa22.49■■□□□ 1.19
LRP8-202ENST00000347547 CUX1P39880 1505 aa22.45■■□□□ 1.18
LRP8-202ENST00000347547 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
LRP8-202ENST00000347547 RRBP1Q9P2E9 1410 aaKnown RBP22.41■■□□□ 1.18
LRP8-202ENST00000347547 RBM19Q9Y4C8 960 aaKnown RBP22.38■■□□□ 1.17
LRP8-202ENST00000347547 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
LRP8-202ENST00000347547 FKBP8Q14318 412 aa22.35■■□□□ 1.17
LRP8-202ENST00000347547 LAMC3Q9Y6N6 1575 aa22.34■■□□□ 1.17
LRP8-202ENST00000347547 NESP48681 1621 aa22.34■■□□□ 1.17
LRP8-202ENST00000347547 KCNH8Q96L42 1107 aa22.32■■□□□ 1.16
LRP8-202ENST00000347547 BCANQ96GW7 911 aa22.3■■□□□ 1.16
LRP8-202ENST00000347547 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
LRP8-202ENST00000347547 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
LRP8-202ENST00000347547 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
LRP8-202ENST00000347547 NEFLP07196 543 aa22.26■■□□□ 1.15
LRP8-202ENST00000347547 MAPKBP1O60336 1514 aa22.21■■□□□ 1.15
LRP8-202ENST00000347547 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms