RNA–Protein interactions for RNA: ENST00000304760.2

SHE-201, Transcript of Src homology 2 domain containing E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHE, Length 6,243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-201ENST00000304760 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
SHE-201ENST00000304760 EHMT2Q96KQ7 1210 aa29.09■■■□□ 2.25
SHE-201ENST00000304760 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
SHE-201ENST00000304760 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
SHE-201ENST00000304760 PELP1Q8IZL8 1130 aaKnown RBP28.12■■■□□ 2.09
SHE-201ENST00000304760 TTBK1Q5TCY1 1321 aaPredicted RBP28.03■■■□□ 2.08
SHE-201ENST00000304760 APLP2Q06481 763 aa27.99■■■□□ 2.07
SHE-201ENST00000304760 RANGAP1P46060 587 aaPredicted RBP27.72■■■□□ 2.03
SHE-201ENST00000304760 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
SHE-201ENST00000304760 ATP1B4Q9UN42 357 aaPredicted RBP27.5■■□□□ 1.99
SHE-201ENST00000304760 ERICH6Q7L0X2 663 aa27.43■■□□□ 1.98
SHE-201ENST00000304760 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.95
SHE-201ENST00000304760 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
SHE-201ENST00000304760 CCER1Q8TC90 406 aaPredicted RBP26.94■■□□□ 1.9
SHE-201ENST00000304760 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
SHE-201ENST00000304760 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
SHE-201ENST00000304760 CENPBP07199 599 aaPredicted RBP26.68■■□□□ 1.86
SHE-201ENST00000304760 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.86
SHE-201ENST00000304760 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
SHE-201ENST00000304760 NEFLP07196 543 aa26.57■■□□□ 1.84
SHE-201ENST00000304760 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
SHE-201ENST00000304760 POLR3GLQ9BT43 218 aa26.52■■□□□ 1.84
SHE-201ENST00000304760 MYT1Q01538 1121 aa26.48■■□□□ 1.83
SHE-201ENST00000304760 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
SHE-201ENST00000304760 CNGB1Q14028 1251 aaPredicted RBP26.42■■□□□ 1.82
SHE-201ENST00000304760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.37■■□□□ 1.81
SHE-201ENST00000304760 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
SHE-201ENST00000304760 ITGAEP38570 1179 aa26.24■■□□□ 1.79
SHE-201ENST00000304760 SLC4A1APQ9BWU0 796 aaKnown RBP26.22■■□□□ 1.79
SHE-201ENST00000304760 DAXXQ9UER7 740 aaPredicted RBP26.19■■□□□ 1.78
SHE-201ENST00000304760 ZEB1P37275 1124 aaPredicted RBP26.18■■□□□ 1.78
SHE-201ENST00000304760 CLSPNQ9HAW4 1339 aa25.67■■□□□ 1.7
SHE-201ENST00000304760 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
SHE-201ENST00000304760 BCL11AQ9H165 835 aa25.53■■□□□ 1.68
SHE-201ENST00000304760 SLC24A1O60721 1099 aa25.52■■□□□ 1.68
SHE-201ENST00000304760 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
SHE-201ENST00000304760 TRIM52Q96A61 297 aa25.31■■□□□ 1.64
SHE-201ENST00000304760 FAM50AQ14320 339 aaKnown RBP25.3■■□□□ 1.64
SHE-201ENST00000304760 BCANQ96GW7 911 aa25.27■■□□□ 1.64
SHE-201ENST00000304760 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
SHE-201ENST00000304760 ZNF326Q5BKZ1 582 aaKnown RBP25.23■■□□□ 1.63
SHE-201ENST00000304760 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
SHE-201ENST00000304760 HRCP23327 699 aa25.17■■□□□ 1.62
SHE-201ENST00000304760 NEUROD1Q13562 356 aa25.16■■□□□ 1.62
SHE-201ENST00000304760 ZBTB47Q9UFB7 747 aaPredicted RBP25.15■■□□□ 1.62
SHE-201ENST00000304760 FBLN2P98095 1184 aa25.12■■□□□ 1.61
SHE-201ENST00000304760 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
SHE-201ENST00000304760 CANXP27824 592 aaKnown RBP24.96■■□□□ 1.59
SHE-201ENST00000304760 ARID3CA6NKF2 412 aa24.93■■□□□ 1.58
SHE-201ENST00000304760 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.56
SHE-201ENST00000304760 DIEXFQ68CQ4 756 aaKnown RBP24.8■■□□□ 1.56
SHE-201ENST00000304760 NEFMP07197 916 aa24.76■■□□□ 1.55
SHE-201ENST00000304760 ANP32CO43423 234 aa24.65■■□□□ 1.54
SHE-201ENST00000304760 ZNF777Q9ULD5 760 aaPredicted RBP24.62■■□□□ 1.53
SHE-201ENST00000304760 P3H3Q8IVL6 736 aa24.61■■□□□ 1.53
SHE-201ENST00000304760 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
SHE-201ENST00000304760 CDK11AQ9UQ88 783 aaPredicted RBP24.58■■□□□ 1.52
SHE-201ENST00000304760 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
SHE-201ENST00000304760 NPM2Q86SE8 214 aaKnown RBP24.55■■□□□ 1.52
SHE-201ENST00000304760 STAG3Q9UJ98 1225 aa24.52■■□□□ 1.52
SHE-201ENST00000304760 A0A0G2JS52 829 aa24.51■■□□□ 1.51
SHE-201ENST00000304760 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
SHE-201ENST00000304760 PLEKHG5O94827 1062 aa24.43■■□□□ 1.5
SHE-201ENST00000304760 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
SHE-201ENST00000304760 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
SHE-201ENST00000304760 ABCC9O60706 1549 aa24.33■■□□□ 1.48
SHE-201ENST00000304760 HSP90AA1P07900 732 aaKnown RBP24.31■■□□□ 1.48
SHE-201ENST00000304760 ZBTB7CA1YPR0 619 aa24.27■■□□□ 1.48
SHE-201ENST00000304760 SALL2Q9Y467 1007 aaPredicted RBP24.27■■□□□ 1.48
SHE-201ENST00000304760 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
SHE-201ENST00000304760 ANP32BQ92688 251 aaKnown RBP24.15■■□□□ 1.46
SHE-201ENST00000304760 ARXQ96QS3 562 aa24.15■■□□□ 1.46
SHE-201ENST00000304760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.45
SHE-201ENST00000304760 EIF5BO60841 1220 aaKnown RBP24.12■■□□□ 1.45
SHE-201ENST00000304760 NPM1P06748 294 aaKnown RBP eCLIP24.08■■□□□ 1.45
SHE-201ENST00000304760 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
SHE-201ENST00000304760 FAM9BQ8IZU0 186 aa24.02■■□□□ 1.43
SHE-201ENST00000304760 TULP1O00294 542 aaPredicted RBP24■■□□□ 1.43
SHE-201ENST00000304760 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
SHE-201ENST00000304760 CDK11BP21127 795 aaKnown RBP23.96■■□□□ 1.43
SHE-201ENST00000304760 FKBP8Q14318 412 aa23.9■■□□□ 1.42
SHE-201ENST00000304760 CHIC2Q9UKJ5 165 aa23.89■■□□□ 1.42
SHE-201ENST00000304760 KDM2AQ9Y2K7 1162 aa23.88■■□□□ 1.41
SHE-201ENST00000304760 HNRNPUQ00839 825 aaKnown RBP eCLIP23.86■■□□□ 1.41
SHE-201ENST00000304760 HAP1P54257 671 aaPredicted RBP23.83■■□□□ 1.4
SHE-201ENST00000304760 NBR1Q14596 966 aa23.81■■□□□ 1.4
SHE-201ENST00000304760 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
SHE-201ENST00000304760 WDR43Q15061 677 aaKnown RBP eCLIP23.79■■□□□ 1.4
SHE-201ENST00000304760 TPRNQ4KMQ1 711 aa23.76■■□□□ 1.39
SHE-201ENST00000304760 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
SHE-201ENST00000304760 TAOK2Q9UL54 1235 aa23.73■■□□□ 1.39
SHE-201ENST00000304760 TMC1Q8TDI8 760 aa23.72■■□□□ 1.39
SHE-201ENST00000304760 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.71■■□□□ 1.39
SHE-201ENST00000304760 PPP1R15AO75807 674 aaPredicted RBP23.71■■□□□ 1.39
SHE-201ENST00000304760 MYH16Q9H6N6 1097 aa23.69■■□□□ 1.38
SHE-201ENST00000304760 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
SHE-201ENST00000304760 CCDC136Q96JN2 1154 aa23.65■■□□□ 1.38
SHE-201ENST00000304760 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
SHE-201ENST00000304760 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.37
SHE-201ENST00000304760 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms