Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.67■□□□□ 0.26
CDH16O75309 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH16O75309 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH16O75309 CYP2A7P1-201ENST00000595391 815 ntBASIC16.67■□□□□ 0.26
CDH16O75309 AC020765.3-201ENST00000613051 740 ntBASIC16.67■□□□□ 0.26
CDH16O75309 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.67■□□□□ 0.26
CDH16O75309 PGM5P2-202ENST00000637225 1043 ntBASIC16.67■□□□□ 0.26
CDH16O75309 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDH16O75309 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDH16O75309 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH16O75309 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDH16O75309 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH16O75309 PKD1P5-201ENST00000532415 10291 ntBASIC16.67■□□□□ 0.26
CDH16O75309 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH16O75309 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 AC063926.3-201ENST00000624734 5658 ntBASIC16.66■□□□□ 0.26
CDH16O75309 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH16O75309 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CDH16O75309 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH16O75309 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH16O75309 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH16O75309 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH16O75309 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH16O75309 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH16O75309 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH16O75309 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 SSR4P1-203ENST00000599569 2260 ntBASIC16.65■□□□□ 0.26
CDH16O75309 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 TSSC2-201ENST00000450217 709 ntBASIC16.65■□□□□ 0.26
CDH16O75309 AC087163.2-201ENST00000457299 853 ntBASIC16.65■□□□□ 0.26
CDH16O75309 AL139424.1-201ENST00000607572 797 ntBASIC16.65■□□□□ 0.26
CDH16O75309 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 AL592424.1-201ENST00000563624 1536 ntBASIC16.65■□□□□ 0.26
CDH16O75309 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH16O75309 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH16O75309 AL136379.1-201ENST00000623471 2642 ntBASIC16.65■□□□□ 0.26
CDH16O75309 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH16O75309 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDH16O75309 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH16O75309 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH16O75309 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms