RNA–Protein interactions for RNA: ENST00000275072.4

PM20D2-201, Transcript of peptidase M20 domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PM20D2, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PM20D2-201ENST00000275072 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
PM20D2-201ENST00000275072 DCAF8L2P0C7V8 631 aa27.6■■■□□ 2.01
PM20D2-201ENST00000275072 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
PM20D2-201ENST00000275072 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
PM20D2-201ENST00000275072 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
PM20D2-201ENST00000275072 PCGF6Q9BYE7 350 aa25.28■■□□□ 1.64
PM20D2-201ENST00000275072 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
PM20D2-201ENST00000275072 TTBK1Q5TCY1 1321 aaPredicted RBP24.94■■□□□ 1.58
PM20D2-201ENST00000275072 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
PM20D2-201ENST00000275072 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
PM20D2-201ENST00000275072 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
PM20D2-201ENST00000275072 APLP2Q06481 763 aa24.43■■□□□ 1.5
PM20D2-201ENST00000275072 LOC105371045A0A1W2PR82 267 aa24.39■■□□□ 1.5
PM20D2-201ENST00000275072 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
PM20D2-201ENST00000275072 CCER1Q8TC90 406 aaPredicted RBP24.29■■□□□ 1.48
PM20D2-201ENST00000275072 HRCP23327 699 aa24.18■■□□□ 1.46
PM20D2-201ENST00000275072 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
PM20D2-201ENST00000275072 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
PM20D2-201ENST00000275072 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
PM20D2-201ENST00000275072 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
PM20D2-201ENST00000275072 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
PM20D2-201ENST00000275072 ATP1B4Q9UN42 357 aaPredicted RBP23.84■■□□□ 1.41
PM20D2-201ENST00000275072 PELP1Q8IZL8 1130 aaKnown RBP23.83■■□□□ 1.41
PM20D2-201ENST00000275072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.36
PM20D2-201ENST00000275072 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
PM20D2-201ENST00000275072 ITGAEP38570 1179 aa23.48■■□□□ 1.35
PM20D2-201ENST00000275072 ABCC9O60706 1549 aa23.34■■□□□ 1.33
PM20D2-201ENST00000275072 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
PM20D2-201ENST00000275072 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
PM20D2-201ENST00000275072 NEFLP07196 543 aa23.07■■□□□ 1.28
PM20D2-201ENST00000275072 ERICH6Q7L0X2 663 aa23.03■■□□□ 1.28
PM20D2-201ENST00000275072 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
PM20D2-201ENST00000275072 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
PM20D2-201ENST00000275072 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
PM20D2-201ENST00000275072 POLR3GLQ9BT43 218 aa22.86■■□□□ 1.25
PM20D2-201ENST00000275072 GTF3C3Q9Y5Q9 886 aa22.84■■□□□ 1.25
PM20D2-201ENST00000275072 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
PM20D2-201ENST00000275072 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
PM20D2-201ENST00000275072 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
PM20D2-201ENST00000275072 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
PM20D2-201ENST00000275072 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.22
PM20D2-201ENST00000275072 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
PM20D2-201ENST00000275072 BCANQ96GW7 911 aa22.59■■□□□ 1.21
PM20D2-201ENST00000275072 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
PM20D2-201ENST00000275072 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
PM20D2-201ENST00000275072 MYT1Q01538 1121 aa22.46■■□□□ 1.19
PM20D2-201ENST00000275072 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
PM20D2-201ENST00000275072 MYT1LQ9UL68 1186 aa22.4■■□□□ 1.18
PM20D2-201ENST00000275072 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
PM20D2-201ENST00000275072 CCDC180Q9P1Z9 1646 aa22.36■■□□□ 1.17
PM20D2-201ENST00000275072 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
PM20D2-201ENST00000275072 ZNF326Q5BKZ1 582 aaKnown RBP22.29■■□□□ 1.16
PM20D2-201ENST00000275072 SCAF1Q9H7N4 1312 aaKnown RBP22.28■■□□□ 1.16
PM20D2-201ENST00000275072 ANP32CO43423 234 aa22.23■■□□□ 1.15
PM20D2-201ENST00000275072 FBLN2P98095 1184 aa22.14■■□□□ 1.13
PM20D2-201ENST00000275072 MIER1Q8N108 512 aa22.12■■□□□ 1.13
PM20D2-201ENST00000275072 DDX10Q13206 875 aaKnown RBP22.09■■□□□ 1.13
PM20D2-201ENST00000275072 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
PM20D2-201ENST00000275072 DAXXQ9UER7 740 aaPredicted RBP22.04■■□□□ 1.12
PM20D2-201ENST00000275072 HIRIP3Q9BW71 556 aaPredicted RBP22.03■■□□□ 1.12
PM20D2-201ENST00000275072 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
PM20D2-201ENST00000275072 CLIP1P30622 1438 aa21.99■■□□□ 1.11
PM20D2-201ENST00000275072 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
PM20D2-201ENST00000275072 FKBP8Q14318 412 aa21.96■■□□□ 1.11
PM20D2-201ENST00000275072 ZNF777Q9ULD5 760 aaPredicted RBP21.95■■□□□ 1.1
PM20D2-201ENST00000275072 CHIC2Q9UKJ5 165 aa21.91■■□□□ 1.1
PM20D2-201ENST00000275072 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
PM20D2-201ENST00000275072 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
PM20D2-201ENST00000275072 CLSPNQ9HAW4 1339 aa21.85■■□□□ 1.09
PM20D2-201ENST00000275072 HNRNPUQ00839 825 aaKnown RBP eCLIP21.83■■□□□ 1.09
PM20D2-201ENST00000275072 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
PM20D2-201ENST00000275072 RB1CC1Q8TDY2 1594 aa21.79■■□□□ 1.08
PM20D2-201ENST00000275072 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
PM20D2-201ENST00000275072 FAM9BQ8IZU0 186 aa21.78■■□□□ 1.08
PM20D2-201ENST00000275072 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
PM20D2-201ENST00000275072 SOGA1O94964 1423 aa21.76■■□□□ 1.07
PM20D2-201ENST00000275072 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
PM20D2-201ENST00000275072 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
PM20D2-201ENST00000275072 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
PM20D2-201ENST00000275072 EEA1Q15075 1411 aa21.66■■□□□ 1.06
PM20D2-201ENST00000275072 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
PM20D2-201ENST00000275072 RRP7BPQ9NSQ0 103 aa21.64■■□□□ 1.05
PM20D2-201ENST00000275072 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
PM20D2-201ENST00000275072 MTUS2Q5JR59 1369 aa21.62■■□□□ 1.05
PM20D2-201ENST00000275072 NACADO15069 1562 aa21.61■■□□□ 1.05
PM20D2-201ENST00000275072 SIN3AQ96ST3 1273 aa21.6■■□□□ 1.05
PM20D2-201ENST00000275072 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
PM20D2-201ENST00000275072 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
PM20D2-201ENST00000275072 BCL11AQ9H165 835 aa21.56■■□□□ 1.04
PM20D2-201ENST00000275072 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
PM20D2-201ENST00000275072 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
PM20D2-201ENST00000275072 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
PM20D2-201ENST00000275072 MRS2Q9HD23 443 aa21.53■■□□□ 1.04
PM20D2-201ENST00000275072 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
PM20D2-201ENST00000275072 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
PM20D2-201ENST00000275072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.03
PM20D2-201ENST00000275072 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
PM20D2-201ENST00000275072 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
PM20D2-201ENST00000275072 ANP32AP39687 249 aaKnown RBP21.42■■□□□ 1.02
PM20D2-201ENST00000275072 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms