RNA–Protein interactions for RNA: ENST00000592434.5

TOMM40-207, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TOMM40, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-207ENST00000592434 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
TOMM40-207ENST00000592434 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
TOMM40-207ENST00000592434 SHROOM4Q9ULL8 1493 aa29.41■■■□□ 2.3
TOMM40-207ENST00000592434 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
TOMM40-207ENST00000592434 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
TOMM40-207ENST00000592434 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
TOMM40-207ENST00000592434 ABCC9O60706 1549 aa27.56■■■□□ 2
TOMM40-207ENST00000592434 EHMT2Q96KQ7 1210 aa27.15■■□□□ 1.94
TOMM40-207ENST00000592434 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
TOMM40-207ENST00000592434 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
TOMM40-207ENST00000592434 FAM9AQ8IZU1 332 aaPredicted RBP26.82■■□□□ 1.88
TOMM40-207ENST00000592434 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.877e-8■□□□□ 9.5
TOMM40-207ENST00000592434 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
TOMM40-207ENST00000592434 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
TOMM40-207ENST00000592434 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
TOMM40-207ENST00000592434 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
TOMM40-207ENST00000592434 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
TOMM40-207ENST00000592434 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
TOMM40-207ENST00000592434 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
TOMM40-207ENST00000592434 NACADO15069 1562 aa26.09■■□□□ 1.77
TOMM40-207ENST00000592434 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
TOMM40-207ENST00000592434 TTBK1Q5TCY1 1321 aaPredicted RBP26.02■■□□□ 1.76
TOMM40-207ENST00000592434 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
TOMM40-207ENST00000592434 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
TOMM40-207ENST00000592434 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
TOMM40-207ENST00000592434 WIZO95785 1651 aa25.74■■□□□ 1.71
TOMM40-207ENST00000592434 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
TOMM40-207ENST00000592434 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
TOMM40-207ENST00000592434 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
TOMM40-207ENST00000592434 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
TOMM40-207ENST00000592434 HRCP23327 699 aa25.24■■□□□ 1.63
TOMM40-207ENST00000592434 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
TOMM40-207ENST00000592434 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
TOMM40-207ENST00000592434 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
TOMM40-207ENST00000592434 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
TOMM40-207ENST00000592434 SOGA1O94964 1423 aa25.08■■□□□ 1.61
TOMM40-207ENST00000592434 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
TOMM40-207ENST00000592434 BAZ1BQ9UIG0 1483 aaKnown RBP25.04■■□□□ 1.6
TOMM40-207ENST00000592434 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
TOMM40-207ENST00000592434 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
TOMM40-207ENST00000592434 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
TOMM40-207ENST00000592434 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
TOMM40-207ENST00000592434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.92■■□□□ 1.58
TOMM40-207ENST00000592434 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
TOMM40-207ENST00000592434 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
TOMM40-207ENST00000592434 APLP2Q06481 763 aa24.8■■□□□ 1.56
TOMM40-207ENST00000592434 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
TOMM40-207ENST00000592434 HNRNPUL2Q1KMD3 747 aaKnown RBP24.76■■□□□ 1.55
TOMM40-207ENST00000592434 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.53
TOMM40-207ENST00000592434 CEP162Q5TB80 1403 aa24.63■■□□□ 1.53
TOMM40-207ENST00000592434 P3H3Q8IVL6 736 aa24.61■■□□□ 1.53
TOMM40-207ENST00000592434 ITGAEP38570 1179 aa24.59■■□□□ 1.53
TOMM40-207ENST00000592434 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
TOMM40-207ENST00000592434 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
TOMM40-207ENST00000592434 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
TOMM40-207ENST00000592434 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
TOMM40-207ENST00000592434 CLIP1P30622 1438 aa24.37■■□□□ 1.49
TOMM40-207ENST00000592434 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
TOMM40-207ENST00000592434 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
TOMM40-207ENST00000592434 ARID3CA6NKF2 412 aa24.28■■□□□ 1.48
TOMM40-207ENST00000592434 ZEB1P37275 1124 aaPredicted RBP24.28■■□□□ 1.48
TOMM40-207ENST00000592434 EEA1Q15075 1411 aa24.25■■□□□ 1.47
TOMM40-207ENST00000592434 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
TOMM40-207ENST00000592434 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
TOMM40-207ENST00000592434 NESP48681 1621 aa24.23■■□□□ 1.47
TOMM40-207ENST00000592434 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
TOMM40-207ENST00000592434 CUX2O14529 1486 aa24.19■■□□□ 1.46
TOMM40-207ENST00000592434 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
TOMM40-207ENST00000592434 KIF27Q86VH2 1401 aa24.14■■□□□ 1.45
TOMM40-207ENST00000592434 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
TOMM40-207ENST00000592434 CUX1P39880 1505 aa24.1■■□□□ 1.45
TOMM40-207ENST00000592434 CFTRP13569 1480 aa24.06■■□□□ 1.44
TOMM40-207ENST00000592434 FAM50AQ14320 339 aaKnown RBP24.05■■□□□ 1.44
TOMM40-207ENST00000592434 TDRD9Q8NDG6 1382 aaKnown RBP24.05■■□□□ 1.44
TOMM40-207ENST00000592434 FBLN2P98095 1184 aa24.04■■□□□ 1.44
TOMM40-207ENST00000592434 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
TOMM40-207ENST00000592434 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
TOMM40-207ENST00000592434 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
TOMM40-207ENST00000592434 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
TOMM40-207ENST00000592434 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
TOMM40-207ENST00000592434 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
TOMM40-207ENST00000592434 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
TOMM40-207ENST00000592434 IGF1RP08069 1367 aa23.9■■□□□ 1.42
TOMM40-207ENST00000592434 YTHDC1Q96MU7 727 aaKnown RBP23.89■■□□□ 1.42
TOMM40-207ENST00000592434 KIF21BO75037 1637 aa23.79■■□□□ 1.4
TOMM40-207ENST00000592434 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
TOMM40-207ENST00000592434 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
TOMM40-207ENST00000592434 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
TOMM40-207ENST00000592434 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
TOMM40-207ENST00000592434 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
TOMM40-207ENST00000592434 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
TOMM40-207ENST00000592434 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
TOMM40-207ENST00000592434 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
TOMM40-207ENST00000592434 PDS5BQ9NTI5 1447 aa23.62■■□□□ 1.37
TOMM40-207ENST00000592434 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
TOMM40-207ENST00000592434 ARHGAP35Q9NRY4 1499 aa23.61■■□□□ 1.37
TOMM40-207ENST00000592434 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.371e-6■■■■□ 26.4
TOMM40-207ENST00000592434 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
TOMM40-207ENST00000592434 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
TOMM40-207ENST00000592434 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms