RNA–Protein interactions for RNA: ENST00000340913.10

HNRNPA1-202, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best) BASIC

Gene HNRNPA1, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-202ENST00000340913 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
HNRNPA1-202ENST00000340913 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
HNRNPA1-202ENST00000340913 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
HNRNPA1-202ENST00000340913 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
HNRNPA1-202ENST00000340913 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
HNRNPA1-202ENST00000340913 HRCP23327 699 aa25.93■■□□□ 1.74
HNRNPA1-202ENST00000340913 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
HNRNPA1-202ENST00000340913 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
HNRNPA1-202ENST00000340913 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
HNRNPA1-202ENST00000340913 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
HNRNPA1-202ENST00000340913 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
HNRNPA1-202ENST00000340913 PPARGC1BQ86YN6 1023 aaKnown RBP25.07■■□□□ 1.6
HNRNPA1-202ENST00000340913 TRIM26Q12899 539 aaPredicted RBP25.01■■□□□ 1.59
HNRNPA1-202ENST00000340913 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
HNRNPA1-202ENST00000340913 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
HNRNPA1-202ENST00000340913 ABCC9O60706 1549 aa24.85■■□□□ 1.57
HNRNPA1-202ENST00000340913 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
HNRNPA1-202ENST00000340913 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
HNRNPA1-202ENST00000340913 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
HNRNPA1-202ENST00000340913 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
HNRNPA1-202ENST00000340913 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
HNRNPA1-202ENST00000340913 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
HNRNPA1-202ENST00000340913 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
HNRNPA1-202ENST00000340913 NACADO15069 1562 aa23.99■■□□□ 1.43
HNRNPA1-202ENST00000340913 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
HNRNPA1-202ENST00000340913 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
HNRNPA1-202ENST00000340913 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
HNRNPA1-202ENST00000340913 ACIN1Q9UKV3 1341 aaKnown RBP23.83■■□□□ 1.41
HNRNPA1-202ENST00000340913 WIZO95785 1651 aa23.82■■□□□ 1.4
HNRNPA1-202ENST00000340913 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
HNRNPA1-202ENST00000340913 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
HNRNPA1-202ENST00000340913 EHMT2Q96KQ7 1210 aa23.77■■□□□ 1.4
HNRNPA1-202ENST00000340913 CENPBP07199 599 aaPredicted RBP23.75■■□□□ 1.39
HNRNPA1-202ENST00000340913 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
HNRNPA1-202ENST00000340913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
HNRNPA1-202ENST00000340913 MYT1Q01538 1121 aa23.67■■□□□ 1.38
HNRNPA1-202ENST00000340913 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
HNRNPA1-202ENST00000340913 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
HNRNPA1-202ENST00000340913 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
HNRNPA1-202ENST00000340913 EEA1Q15075 1411 aa23.53■■□□□ 1.36
HNRNPA1-202ENST00000340913 CEP162Q5TB80 1403 aa23.52■■□□□ 1.36
HNRNPA1-202ENST00000340913 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
HNRNPA1-202ENST00000340913 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
HNRNPA1-202ENST00000340913 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
HNRNPA1-202ENST00000340913 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
HNRNPA1-202ENST00000340913 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
HNRNPA1-202ENST00000340913 ZNF316A6NFI3 1004 aaPredicted RBP23.39■■□□□ 1.33
HNRNPA1-202ENST00000340913 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
HNRNPA1-202ENST00000340913 GOLGA3Q08378 1498 aa23.31■■□□□ 1.32
HNRNPA1-202ENST00000340913 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
HNRNPA1-202ENST00000340913 SOGA1O94964 1423 aa23.29■■□□□ 1.32
HNRNPA1-202ENST00000340913 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
HNRNPA1-202ENST00000340913 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
HNRNPA1-202ENST00000340913 KIF21BO75037 1637 aa23.14■■□□□ 1.3
HNRNPA1-202ENST00000340913 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
HNRNPA1-202ENST00000340913 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
HNRNPA1-202ENST00000340913 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
HNRNPA1-202ENST00000340913 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
HNRNPA1-202ENST00000340913 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
HNRNPA1-202ENST00000340913 CLIP1P30622 1438 aa23■■□□□ 1.27
HNRNPA1-202ENST00000340913 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
HNRNPA1-202ENST00000340913 MIER1Q8N108 512 aa22.98■■□□□ 1.27
HNRNPA1-202ENST00000340913 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
HNRNPA1-202ENST00000340913 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
HNRNPA1-202ENST00000340913 APLP2Q06481 763 aa22.94■■□□□ 1.26
HNRNPA1-202ENST00000340913 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
HNRNPA1-202ENST00000340913 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
HNRNPA1-202ENST00000340913 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
HNRNPA1-202ENST00000340913 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
HNRNPA1-202ENST00000340913 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
HNRNPA1-202ENST00000340913 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
HNRNPA1-202ENST00000340913 DHX57Q6P158 1386 aaKnown RBP22.67■■□□□ 1.22
HNRNPA1-202ENST00000340913 BIVM-ERCC5R4GMW8 1640 aa22.62■■□□□ 1.21
HNRNPA1-202ENST00000340913 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
HNRNPA1-202ENST00000340913 CUX2O14529 1486 aa22.56■■□□□ 1.2
HNRNPA1-202ENST00000340913 RRBP1Q9P2E9 1410 aaKnown RBP22.55■■□□□ 1.2
HNRNPA1-202ENST00000340913 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
HNRNPA1-202ENST00000340913 SUPT16HQ9Y5B9 1047 aaKnown RBP22.54■■□□□ 1.2
HNRNPA1-202ENST00000340913 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
HNRNPA1-202ENST00000340913 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
HNRNPA1-202ENST00000340913 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
HNRNPA1-202ENST00000340913 CCNB3Q8WWL7 1395 aa22.39■■□□□ 1.17
HNRNPA1-202ENST00000340913 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
HNRNPA1-202ENST00000340913 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
HNRNPA1-202ENST00000340913 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
HNRNPA1-202ENST00000340913 MAP3K1Q13233 1512 aa22.3■■□□□ 1.16
HNRNPA1-202ENST00000340913 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
HNRNPA1-202ENST00000340913 CUX1P39880 1505 aa22.25■■□□□ 1.15
HNRNPA1-202ENST00000340913 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
HNRNPA1-202ENST00000340913 ANP32EQ9BTT0 268 aa22.23■■□□□ 1.15
HNRNPA1-202ENST00000340913 MAPKBP1O60336 1514 aa22.21■■□□□ 1.15
HNRNPA1-202ENST00000340913 RAB3GAP2Q9H2M9 1393 aa22.21■■□□□ 1.15
HNRNPA1-202ENST00000340913 TIAM1Q13009 1591 aa22.19■■□□□ 1.14
HNRNPA1-202ENST00000340913 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
HNRNPA1-202ENST00000340913 TIMELESSQ9UNS1 1208 aa22.17■■□□□ 1.14
HNRNPA1-202ENST00000340913 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
HNRNPA1-202ENST00000340913 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
HNRNPA1-202ENST00000340913 ITGAEP38570 1179 aa22.08■■□□□ 1.13
HNRNPA1-202ENST00000340913 CFTRP13569 1480 aa22.08■■□□□ 1.12
HNRNPA1-202ENST00000340913 NEFLP07196 543 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms