Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 DUSP8P4-201ENST00000399538 1761 ntBASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.75■□□□□ 0.75
PCGF1Q9BSM1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 YBX1P4-201ENST00000392794 808 ntBASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCGF1Q9BSM1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 RPS2P7-201ENST00000447334 885 ntBASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCGF1Q9BSM1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCGF1Q9BSM1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 KRT18P10-201ENST00000388836 1287 ntBASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 AC087393.1-201ENST00000582896 145 ntBASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCGF1Q9BSM1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 PVT1_1.1-201ENST00000615125 194 ntBASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF1Q9BSM1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF1Q9BSM1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF1Q9BSM1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF1Q9BSM1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 AC093323.1-202ENST00000635031 2045 ntBASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF1Q9BSM1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms