Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 STK25-214ENST00000436917 499 ntTSL 423.4■■□□□ 1.347e-7■■■□□ 16.6
SFPQP23246 STK25-227ENST00000483603 572 ntTSL 523.4■■□□□ 1.347e-7■■■□□ 16.6
SFPQP23246 STK25-207ENST00000420551 395 ntTSL 523.29■■□□□ 1.327e-7■■■□□ 16.6
SFPQP23246 STK25-213ENST00000436402 600 ntTSL 522.85■■□□□ 1.257e-7■■■□□ 16.6
SFPQP23246 STK25-217ENST00000442307 923 ntTSL 222.27■■□□□ 1.167e-7■■■□□ 16.6
SFPQP23246 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.23■■□□□ 1.157e-7■■■□□ 16.6
SFPQP23246 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.88■■□□□ 1.097e-7■■■□□ 16.6
SFPQP23246 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.957e-7■■■□□ 16.6
SFPQP23246 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.867e-7■■■□□ 16.6
SFPQP23246 STK25-211ENST00000429279 580 ntTSL 420.26■□□□□ 0.837e-7■■■□□ 16.6
SFPQP23246 STK25-232ENST00000495372 561 ntTSL 220.11■□□□□ 0.817e-7■■■□□ 16.6
SFPQP23246 STK25-216ENST00000440109 935 ntTSL 316.52■□□□□ 0.247e-7■■■□□ 16.6
SFPQP23246 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.06■□□□□ 0.167e-7■■■□□ 16.6
SFPQP23246 STK25-220ENST00000461760 644 ntTSL 313.32□□□□□ -0.287e-7■■■□□ 16.6
SFPQP23246 STK25-206ENST00000413760 801 ntTSL 310.74□□□□□ -0.697e-7■■■□□ 16.6
SFPQP23246 ZEB1-214ENST00000558863 1355 ntTSL 526.97■■□□□ 1.915e-7■■■□□ 16.6
SFPQP23246 ZEB1-218ENST00000560196 1014 ntTSL 1 (best)15.95■□□□□ 0.145e-7■■■□□ 16.6
SFPQP23246 ZEB1-206ENST00000488625 6026 ntTSL 1 (best)11.47□□□□□ -0.575e-7■■■□□ 16.6
SFPQP23246 ZEB1-222ENST00000561212 1500 ntTSL 58.35□□□□□ -1.075e-7■■■□□ 16.6
SFPQP23246 ZEB1-203ENST00000424869 887 ntTSL 58.34□□□□□ -1.075e-7■■■□□ 16.6
SFPQP23246 ZEB1-223ENST00000561304 1383 ntTSL 1 (best)8.26□□□□□ -1.095e-7■■■□□ 16.6
SFPQP23246 ZEB1-217ENST00000559858 2745 ntTSL 1 (best)7.76□□□□□ -1.175e-7■■■□□ 16.6
SFPQP23246 ZEB1-221ENST00000561061 970 ntTSL 1 (best)7.49□□□□□ -1.215e-7■■■□□ 16.6
SFPQP23246 ZEB1-204ENST00000437844 6246 ntTSL 1 (best)7.11□□□□□ -1.275e-7■■■□□ 16.6
SFPQP23246 ZEB1-211ENST00000558440 886 ntTSL 1 (best)6.74□□□□□ -1.335e-7■■■□□ 16.6
SFPQP23246 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.345e-7■■■□□ 16.6
SFPQP23246 ZEB1-209ENST00000542879 3645 ntTSL 26.51□□□□□ -1.375e-7■■■□□ 16.6
SFPQP23246 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.455e-7■■■□□ 16.6
SFPQP23246 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.485e-7■■■□□ 16.6
SFPQP23246 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.485e-7■■■□□ 16.6
SFPQP23246 ZEB1-212ENST00000558655 2773 ntTSL 24.37□□□□□ -1.715e-7■■■□□ 16.6
SFPQP23246 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.22■■■□□ 2.751e-6■■■□□ 16.6
SFPQP23246 BCAR1-215ENST00000564028 558 ntTSL 417.71■□□□□ 0.434e-7■■■□□ 16.6
SFPQP23246 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.465e-7■■■□□ 16.6
SFPQP23246 DNAJC5-202ENST00000470551 5287 ntTSL 216.59■□□□□ 0.255e-7■■■□□ 16.6
SFPQP23246 IGF1R-203ENST00000557938 574 ntTSL 411.04□□□□□ -0.641e-6■■■□□ 16.6
SFPQP23246 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.521e-6■■■□□ 16.5
SFPQP23246 LRP5-206ENST00000529993 5103 ntTSL 1 (best)17.47■□□□□ 0.391e-6■■■□□ 16.5
SFPQP23246 BCAR1-210ENST00000561970 594 ntTSL 432.76■■■□□ 2.832e-7■■■□□ 16.5
SFPQP23246 VAV2-205ENST00000486113 523 ntTSL 214.17□□□□□ -0.142e-6■■■□□ 16.5
SFPQP23246 MSI2-214ENST00000581776 493 ntTSL 26.33□□□□□ -1.41e-6■■■□□ 16.5
SFPQP23246 TNS3-208ENST00000457718 3836 ntTSL 512.75□□□□□ -0.372e-6■■■□□ 16.5
SFPQP23246 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.452e-6■■■□□ 16.5
SFPQP23246 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC13.83□□□□□ -0.21e-6■■■□□ 16.5
SFPQP23246 MACROD1-207ENST00000543422 403 ntTSL 315.95■□□□□ 0.144e-8■■■□□ 16.5
SFPQP23246 ZEB1-220ENST00000560909 564 ntTSL 45.97□□□□□ -1.454e-8■■■□□ 16.5
SFPQP23246 TNS3-207ENST00000450444 1832 ntTSL 514.81□□□□□ -0.043e-6■■■□□ 16.5
SFPQP23246 TNS3-206ENST00000442536 1166 ntTSL 1 (best) BASIC11.79□□□□□ -0.523e-6■■■□□ 16.5
SFPQP23246 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.14□□□□□ -1.273e-6■■■□□ 16.5
SFPQP23246 CHN2-204ENST00000409922 740 ntTSL 210.55□□□□□ -0.723e-7■■■□□ 16.5
SFPQP23246 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.09■□□□□ 0.654e-7■■■□□ 16.5
SFPQP23246 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.464e-7■■■□□ 16.5
SFPQP23246 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.434e-7■■■□□ 16.5
SFPQP23246 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.284e-7■■■□□ 16.5
SFPQP23246 BCAR1-211ENST00000562556 4659 ntTSL 215.49■□□□□ 0.074e-7■■■□□ 16.5
SFPQP23246 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.094e-7■■■□□ 16.5
SFPQP23246 GNB1-202ENST00000434686 684 ntTSL 311.51□□□□□ -0.573e-7■■■□□ 16.5
SFPQP23246 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30■■■□□ 2.399e-7■■■□□ 16.4
SFPQP23246 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.859e-7■■■□□ 16.4
SFPQP23246 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.51■■□□□ 1.679e-7■■■□□ 16.4
SFPQP23246 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.389e-7■■■□□ 16.4
SFPQP23246 KLHL22-208ENST00000470335 824 ntTSL 222.48■■□□□ 1.199e-7■■■□□ 16.4
SFPQP23246 ETS2-203ENST00000432278 1033 ntTSL 521.41■■□□□ 1.029e-7■■■□□ 16.4
SFPQP23246 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.879e-7■■■□□ 16.4
SFPQP23246 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.869e-7■■■□□ 16.4
SFPQP23246 LARGE1-213ENST00000494763 537 ntTSL 418.85■□□□□ 0.619e-7■■■□□ 16.4
SFPQP23246 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.479e-7■■■□□ 16.4
SFPQP23246 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.9■□□□□ 0.469e-7■■■□□ 16.4
SFPQP23246 KLHL22-203ENST00000431430 572 ntTSL 417.71■□□□□ 0.439e-7■■■□□ 16.4
SFPQP23246 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.379e-7■■■□□ 16.4
SFPQP23246 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.36■□□□□ 0.379e-7■■■□□ 16.4
SFPQP23246 LARGE1-204ENST00000413114 773 ntTSL 417.3■□□□□ 0.369e-7■■■□□ 16.4
SFPQP23246 ERGIC1-209ENST00000520642 539 ntTSL 417.27■□□□□ 0.369e-7■■■□□ 16.4
SFPQP23246 KLHL22-207ENST00000458248 742 ntTSL 316.77■□□□□ 0.289e-7■■■□□ 16.4
SFPQP23246 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.269e-7■■■□□ 16.4
SFPQP23246 KLHL22-205ENST00000444967 1045 ntTSL 316.56■□□□□ 0.249e-7■■■□□ 16.4
SFPQP23246 KLHL22-212ENST00000494929 550 ntTSL 416.14■□□□□ 0.179e-7■■■□□ 16.4
SFPQP23246 KLHL22-204ENST00000443285 792 ntTSL 415.98■□□□□ 0.159e-7■■■□□ 16.4
SFPQP23246 ERGIC1-207ENST00000520326 647 ntTSL 515.8■□□□□ 0.129e-7■■■□□ 16.4
SFPQP23246 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15.65■□□□□ 0.19e-7■■■□□ 16.4
SFPQP23246 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.089e-7■■■□□ 16.4
SFPQP23246 KLHL22-209ENST00000479601 1389 ntTSL 515.39■□□□□ 0.059e-7■■■□□ 16.4
SFPQP23246 SGTA-204ENST00000589251 637 ntTSL 315.05■□□□□ -09e-7■■■□□ 16.4
SFPQP23246 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.069e-7■■■□□ 16.4
SFPQP23246 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.089e-7■■■□□ 16.4
SFPQP23246 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.25□□□□□ -0.139e-7■■■□□ 16.4
SFPQP23246 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.249e-7■■■□□ 16.4
SFPQP23246 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.269e-7■■■□□ 16.4
SFPQP23246 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC13.28□□□□□ -0.289e-7■■■□□ 16.4
SFPQP23246 KLHL22-206ENST00000451553 724 ntTSL 313.19□□□□□ -0.39e-7■■■□□ 16.4
SFPQP23246 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC12.02□□□□□ -0.499e-7■■■□□ 16.4
SFPQP23246 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.499e-7■■■□□ 16.4
SFPQP23246 HNRNPC-213ENST00000554891 644 ntTSL 511.84□□□□□ -0.519e-7■■■□□ 16.4
SFPQP23246 HNRNPC-232ENST00000557442 1308 ntTSL 211.75□□□□□ -0.539e-7■■■□□ 16.4
SFPQP23246 GRB2-210ENST00000582582 584 ntTSL 411.52□□□□□ -0.579e-7■■■□□ 16.4
SFPQP23246 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC11.47□□□□□ -0.579e-7■■■□□ 16.4
SFPQP23246 GRB2-208ENST00000578961 687 ntTSL 3 BASIC11.42□□□□□ -0.589e-7■■■□□ 16.4
SFPQP23246 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.589e-7■■■□□ 16.4
SFPQP23246 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC11.38□□□□□ -0.599e-7■■■□□ 16.4
SFPQP23246 HNRNPC-218ENST00000555215 781 ntTSL 511.29□□□□□ -0.69e-7■■■□□ 16.4
Retrieved 100 of 4,991 protein–RNA pairs in 301.8 ms