RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
LRP5-206ENST00000529993 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
LRP5-206ENST00000529993 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
LRP5-206ENST00000529993 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
LRP5-206ENST00000529993 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
LRP5-206ENST00000529993 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
LRP5-206ENST00000529993 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
LRP5-206ENST00000529993 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
LRP5-206ENST00000529993 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
LRP5-206ENST00000529993 APLP2Q06481 763 aa23.36■■□□□ 1.33
LRP5-206ENST00000529993 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.31
LRP5-206ENST00000529993 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
LRP5-206ENST00000529993 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
LRP5-206ENST00000529993 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
LRP5-206ENST00000529993 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
LRP5-206ENST00000529993 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
LRP5-206ENST00000529993 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
LRP5-206ENST00000529993 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
LRP5-206ENST00000529993 TRIM26Q12899 539 aaPredicted RBP22.75■■□□□ 1.23
LRP5-206ENST00000529993 HRCP23327 699 aa22.74■■□□□ 1.23
LRP5-206ENST00000529993 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
LRP5-206ENST00000529993 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.22
LRP5-206ENST00000529993 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
LRP5-206ENST00000529993 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
LRP5-206ENST00000529993 ABCC9O60706 1549 aa22.27■■□□□ 1.16
LRP5-206ENST00000529993 ITGAEP38570 1179 aa22.26■■□□□ 1.15
LRP5-206ENST00000529993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
LRP5-206ENST00000529993 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
LRP5-206ENST00000529993 NEFLP07196 543 aa21.95■■□□□ 1.11
LRP5-206ENST00000529993 ERICH6Q7L0X2 663 aa21.91■■□□□ 1.1
LRP5-206ENST00000529993 DIEXFQ68CQ4 756 aaKnown RBP21.87■■□□□ 1.09
LRP5-206ENST00000529993 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
LRP5-206ENST00000529993 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
LRP5-206ENST00000529993 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
LRP5-206ENST00000529993 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
LRP5-206ENST00000529993 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
LRP5-206ENST00000529993 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
LRP5-206ENST00000529993 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
LRP5-206ENST00000529993 MYT1LQ9UL68 1186 aa21.47■■□□□ 1.03
LRP5-206ENST00000529993 GTF3C3Q9Y5Q9 886 aa21.46■■□□□ 1.03
LRP5-206ENST00000529993 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
LRP5-206ENST00000529993 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
LRP5-206ENST00000529993 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
LRP5-206ENST00000529993 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
LRP5-206ENST00000529993 TRIM52Q96A61 297 aa21.39■■□□□ 1.02
LRP5-206ENST00000529993 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
LRP5-206ENST00000529993 MYT1Q01538 1121 aa21.3■■□□□ 1
LRP5-206ENST00000529993 BCANQ96GW7 911 aa21.27■■□□□ 1
LRP5-206ENST00000529993 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
LRP5-206ENST00000529993 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
LRP5-206ENST00000529993 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
LRP5-206ENST00000529993 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
LRP5-206ENST00000529993 FBLN2P98095 1184 aa21.16■□□□□ 0.98
LRP5-206ENST00000529993 ANP32CO43423 234 aa21.13■□□□□ 0.97
LRP5-206ENST00000529993 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
LRP5-206ENST00000529993 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.96
LRP5-206ENST00000529993 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
LRP5-206ENST00000529993 CLIP1P30622 1438 aa20.88■□□□□ 0.93
LRP5-206ENST00000529993 DDX10Q13206 875 aaKnown RBP20.87■□□□□ 0.93
LRP5-206ENST00000529993 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
LRP5-206ENST00000529993 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
LRP5-206ENST00000529993 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
LRP5-206ENST00000529993 MIER1Q8N108 512 aa20.81■□□□□ 0.92
LRP5-206ENST00000529993 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
LRP5-206ENST00000529993 CHIC2Q9UKJ5 165 aa20.79■□□□□ 0.92
LRP5-206ENST00000529993 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
LRP5-206ENST00000529993 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
LRP5-206ENST00000529993 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.91
LRP5-206ENST00000529993 HIRIP3Q9BW71 556 aaPredicted RBP20.74■□□□□ 0.91
LRP5-206ENST00000529993 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
LRP5-206ENST00000529993 FKBP8Q14318 412 aa20.73■□□□□ 0.91
LRP5-206ENST00000529993 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
LRP5-206ENST00000529993 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
LRP5-206ENST00000529993 NACADO15069 1562 aa20.7■□□□□ 0.9
LRP5-206ENST00000529993 EEA1Q15075 1411 aa20.67■□□□□ 0.9
LRP5-206ENST00000529993 HNRNPUQ00839 825 aaKnown RBP eCLIP20.66■□□□□ 0.9
LRP5-206ENST00000529993 TNIKQ9UKE5 1360 aa20.65■□□□□ 0.9
LRP5-206ENST00000529993 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
LRP5-206ENST00000529993 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
LRP5-206ENST00000529993 SOGA1O94964 1423 aa20.57■□□□□ 0.88
LRP5-206ENST00000529993 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
LRP5-206ENST00000529993 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
LRP5-206ENST00000529993 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
LRP5-206ENST00000529993 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
LRP5-206ENST00000529993 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
LRP5-206ENST00000529993 SALL2Q9Y467 1007 aaPredicted RBP20.5■□□□□ 0.87
LRP5-206ENST00000529993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.863e-8■□□□□ 10.3
LRP5-206ENST00000529993 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
LRP5-206ENST00000529993 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
LRP5-206ENST00000529993 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
LRP5-206ENST00000529993 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
LRP5-206ENST00000529993 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
LRP5-206ENST00000529993 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
LRP5-206ENST00000529993 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
LRP5-206ENST00000529993 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
LRP5-206ENST00000529993 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.86
LRP5-206ENST00000529993 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
LRP5-206ENST00000529993 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
LRP5-206ENST00000529993 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
LRP5-206ENST00000529993 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms