Protein–RNA interactions for Protein: Q969Z0

TBRG4, Protein TBRG4, humanhuman

Known RBP eCLIP

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4Q969Z0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.158e-6■■■□□ 18.3
TBRG4Q969Z0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.168e-6■■■□□ 18.3
TBRG4Q969Z0 H2AFY-203ENST00000360597 1772 ntTSL 514.04□□□□□ -0.168e-6■■■□□ 18.3
TBRG4Q969Z0 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.198e-6■■■□□ 18.3
TBRG4Q969Z0 TRAF4-210ENST00000475329 544 ntTSL 313.72□□□□□ -0.218e-6■■■□□ 18.3
TBRG4Q969Z0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.228e-6■■■□□ 18.3
TBRG4Q969Z0 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.288e-6■■■□□ 18.3
TBRG4Q969Z0 AC002985.1-202ENST00000593484 584 ntAPPRIS P1 TSL 513.2□□□□□ -0.38e-6■■■□□ 18.3
TBRG4Q969Z0 BRD1-204ENST00000438393 3051 ntTSL 212.91□□□□□ -0.348e-6■■■□□ 18.3
TBRG4Q969Z0 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC12.63□□□□□ -0.398e-6■■■□□ 18.3
TBRG4Q969Z0 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.48e-6■■■□□ 18.3
TBRG4Q969Z0 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.448e-6■■■□□ 18.3
TBRG4Q969Z0 ADD1-227ENST00000541051 975 ntTSL 212.32□□□□□ -0.448e-6■■■□□ 18.3
TBRG4Q969Z0 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC11.93□□□□□ -0.58e-6■■■□□ 18.3
TBRG4Q969Z0 ADD1-219ENST00000514940 1332 ntTSL 511.43□□□□□ -0.588e-6■■■□□ 18.3
TBRG4Q969Z0 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.68e-6■■■□□ 18.3
TBRG4Q969Z0 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.728e-6■■■□□ 18.3
TBRG4Q969Z0 ADD1-218ENST00000513762 3581 ntTSL 310.35□□□□□ -0.758e-6■■■□□ 18.3
TBRG4Q969Z0 DROSHA-207ENST00000507438 860 ntTSL 410.29□□□□□ -0.768e-6■■■□□ 18.3
TBRG4Q969Z0 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.768e-6■■■□□ 18.3
TBRG4Q969Z0 H2AFY-218ENST00000512507 10982 ntTSL 1 (best)10.21□□□□□ -0.778e-6■■■□□ 18.3
TBRG4Q969Z0 CPLX2-208ENST00000515025 567 ntTSL 410.18□□□□□ -0.788e-6■■■□□ 18.3
TBRG4Q969Z0 UBFD1-205ENST00000566136 2485 ntTSL 29.72□□□□□ -0.858e-6■■■□□ 18.3
TBRG4Q969Z0 UBFD1-202ENST00000563366 709 ntTSL 39.71□□□□□ -0.868e-6■■■□□ 18.3
TBRG4Q969Z0 UBFD1-203ENST00000564106 587 ntTSL 29.71□□□□□ -0.868e-6■■■□□ 18.3
TBRG4Q969Z0 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.868e-6■■■□□ 18.3
TBRG4Q969Z0 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.918e-6■■■□□ 18.3
TBRG4Q969Z0 COPB2-202ENST00000502734 680 ntTSL 28.74□□□□□ -1.018e-6■■■□□ 18.3
TBRG4Q969Z0 DROSHA-215ENST00000512076 1124 ntTSL 1 (best)8.36□□□□□ -1.078e-6■■■□□ 18.3
TBRG4Q969Z0 HSPD1-214ENST00000491249 860 ntTSL 27.37□□□□□ -1.238e-6■■■□□ 18.3
TBRG4Q969Z0 SLC25A36-209ENST00000511757 1307 ntTSL 26.87□□□□□ -1.318e-6■■■□□ 18.3
TBRG4Q969Z0 SLC25A36-213ENST00000514629 544 ntTSL 25.73□□□□□ -1.498e-6■■■□□ 18.3
TBRG4Q969Z0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.58e-6■■■□□ 18.3
TBRG4Q969Z0 MLLT10-208ENST00000438473 1085 ntTSL 54.97□□□□□ -1.618e-6■■■□□ 18.3
TBRG4Q969Z0 COPB2-210ENST00000512309 565 ntTSL 53.71□□□□□ -1.828e-6■■■□□ 18.3
TBRG4Q969Z0 COPB2-203ENST00000503326 433 ntTSL 33.48□□□□□ -1.858e-6■■■□□ 18.3
TBRG4Q969Z0 TCF3-210ENST00000587235 986 ntTSL 524.58■■□□□ 1.531e-6■■■□□ 18.3
TBRG4Q969Z0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.05■■□□□ 1.121e-6■■■□□ 18.3
TBRG4Q969Z0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.762e-6■■■□□ 18.3
TBRG4Q969Z0 SMYD2-203ENST00000460580 1618 ntTSL 1 (best)19.39■□□□□ 0.692e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.676e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.546e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-216ENST00000483306 755 ntTSL 417.96■□□□□ 0.476e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.426e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.51■□□□□ 0.396e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.376e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-218ENST00000490597 1044 ntTSL 217.39■□□□□ 0.376e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.16■□□□□ 0.346e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.81■□□□□ 0.286e-6■■■□□ 18.3
TBRG4Q969Z0 TCF3-208ENST00000586318 631 ntTSL 316.55■□□□□ 0.241e-6■■■□□ 18.3
TBRG4Q969Z0 TRMT11-209ENST00000479748 2093 ntTSL 1 (best)16.53■□□□□ 0.246e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.25■□□□□ 0.196e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.94■□□□□ 0.146e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-208ENST00000438374 560 ntTSL 415.49■□□□□ 0.076e-6■■■□□ 18.3
TBRG4Q969Z0 TRMT11-205ENST00000461129 758 ntTSL 515.27■□□□□ 0.046e-6■■■□□ 18.3
TBRG4Q969Z0 SMYD2-204ENST00000471645 4732 ntTSL 1 (best)15.02□□□□□ -0.012e-6■■■□□ 18.3
TBRG4Q969Z0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.026e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.09□□□□□ -0.156e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-212ENST00000444626 560 ntTSL 513.84□□□□□ -0.196e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.236e-6■■■□□ 18.3
TBRG4Q969Z0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.54□□□□□ -0.242e-6■■■□□ 18.3
TBRG4Q969Z0 SMYD2-206ENST00000491455 3809 ntTSL 213.24□□□□□ -0.292e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-213ENST00000447973 582 ntTSL 413.19□□□□□ -0.36e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-210ENST00000436425 553 ntTSL 412.87□□□□□ -0.356e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-204ENST00000416425 961 ntTSL 312.63□□□□□ -0.396e-6■■■□□ 18.3
TBRG4Q969Z0 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.566e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-217ENST00000483415 3231 ntTSL 1 (best)10.55□□□□□ -0.726e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-211ENST00000437155 933 ntTSL 59.22□□□□□ -0.936e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-214ENST00000455726 710 ntTSL 37.11□□□□□ -1.276e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-220ENST00000493426 581 ntTSL 36.82□□□□□ -1.326e-6■■■□□ 18.3
TBRG4Q969Z0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.53□□□□□ -1.366e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-219ENST00000485037 479 ntTSL 55.71□□□□□ -1.56e-6■■■□□ 18.3
TBRG4Q969Z0 LRRFIP2-213ENST00000461672 563 ntTSL 54.59□□□□□ -1.676e-6■■■□□ 18.3
TBRG4Q969Z0 EWSR1-209ENST00000415761 587 ntTSL 33.04□□□□□ -1.926e-6■■■□□ 18.3
TBRG4Q969Z0 TRMT11-207ENST00000468097 1009 ntTSL 52.52□□□□□ -2.016e-6■■■□□ 18.3
TBRG4Q969Z0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.413e-6■■■□□ 18.3
TBRG4Q969Z0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.37□□□□□ -0.113e-6■■■□□ 18.3
TBRG4Q969Z0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.133e-6■■■□□ 18.3
TBRG4Q969Z0 SLC38A2-213ENST00000553252 846 ntTSL 217.11■□□□□ 0.337e-12■■■□□ 18.2
TBRG4Q969Z0 PUM1-208ENST00000471894 812 ntTSL 310.49□□□□□ -0.736e-11■■■□□ 18.2
TBRG4Q969Z0 PUM1-210ENST00000490546 707 ntTSL 410.34□□□□□ -0.756e-11■■■□□ 18.2
TBRG4Q969Z0 PUM1-223ENST00000532678 793 ntTSL 47.9□□□□□ -1.146e-11■■■□□ 18.2
TBRG4Q969Z0 PUM1-211ENST00000498419 3068 ntTSL 56.64□□□□□ -1.356e-11■■■□□ 18.2
TBRG4Q969Z0 NR2F2-AS1-202ENST00000557863 515 ntTSL 315.78■□□□□ 0.121e-25■■■□□ 18.1
TBRG4Q969Z0 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC11.53□□□□□ -0.561e-25■■■□□ 18.1
TBRG4Q969Z0 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC10.05□□□□□ -0.81e-25■■■□□ 18.1
TBRG4Q969Z0 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC9.34□□□□□ -0.911e-25■■■□□ 18.1
TBRG4Q969Z0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.1□□□□□ -1.271e-25■■■□□ 18.1
TBRG4Q969Z0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.32□□□□□ -1.881e-25■■■□□ 18.1
TBRG4Q969Z0 EML4-208ENST00000482660 584 ntTSL 417.14■□□□□ 0.334e-6■■■□□ 18.1
TBRG4Q969Z0 SNHG16-208ENST00000591956 556 ntTSL 211.2□□□□□ -0.624e-8■■■□□ 18
TBRG4Q969Z0 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC10.14□□□□□ -0.794e-8■■■□□ 18
TBRG4Q969Z0 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC9.86□□□□□ -0.834e-8■■■□□ 18
TBRG4Q969Z0 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC9.56□□□□□ -0.884e-8■■■□□ 18
TBRG4Q969Z0 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)8.8□□□□□ -14e-8■■■□□ 18
TBRG4Q969Z0 SNHG16-206ENST00000587838 884 ntTSL 34.6□□□□□ -1.674e-8■■■□□ 18
TBRG4Q969Z0 SNORD1A-201ENST00000364968 72 ntBASIC1.25□□□□□ -2.214e-8■■■□□ 18
TBRG4Q969Z0 MATR3-221ENST00000513121 573 ntTSL 218.54■□□□□ 0.568e-11■■■□□ 17.9
TBRG4Q969Z0 MATR3-208ENST00000504045 1530 ntTSL 516.46■□□□□ 0.238e-11■■■□□ 17.9
TBRG4Q969Z0 MATR3-222ENST00000513678 444 ntTSL 216.34■□□□□ 0.218e-11■■■□□ 17.9
Retrieved 100 of 20,769 protein–RNA pairs in 153.8 ms