RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
SNHG16-201ENST00000448136 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
SNHG16-201ENST00000448136 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
SNHG16-201ENST00000448136 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
SNHG16-201ENST00000448136 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
SNHG16-201ENST00000448136 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
SNHG16-201ENST00000448136 HRCP23327 699 aa17.12■□□□□ 0.33
SNHG16-201ENST00000448136 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
SNHG16-201ENST00000448136 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
SNHG16-201ENST00000448136 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.24
SNHG16-201ENST00000448136 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
SNHG16-201ENST00000448136 ZCCHC6Q5VYS8 1495 aaKnown RBP16.28■□□□□ 0.2
SNHG16-201ENST00000448136 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
SNHG16-201ENST00000448136 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
SNHG16-201ENST00000448136 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
SNHG16-201ENST00000448136 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
SNHG16-201ENST00000448136 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
SNHG16-201ENST00000448136 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
SNHG16-201ENST00000448136 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
SNHG16-201ENST00000448136 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
SNHG16-201ENST00000448136 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
SNHG16-201ENST00000448136 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
SNHG16-201ENST00000448136 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
SNHG16-201ENST00000448136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
SNHG16-201ENST00000448136 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
SNHG16-201ENST00000448136 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
SNHG16-201ENST00000448136 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
SNHG16-201ENST00000448136 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
SNHG16-201ENST00000448136 CCER1Q8TC90 406 aaPredicted RBP15.57■□□□□ 0.08
SNHG16-201ENST00000448136 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
SNHG16-201ENST00000448136 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
SNHG16-201ENST00000448136 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
SNHG16-201ENST00000448136 CENPBP07199 599 aaPredicted RBP15.5■□□□□ 0.07
SNHG16-201ENST00000448136 MYT1Q01538 1121 aa15.5■□□□□ 0.07
SNHG16-201ENST00000448136 ABCC9O60706 1549 aa15.46■□□□□ 0.07
SNHG16-201ENST00000448136 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
SNHG16-201ENST00000448136 MIER1Q8N108 512 aa15.29■□□□□ 0.04
SNHG16-201ENST00000448136 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
SNHG16-201ENST00000448136 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
SNHG16-201ENST00000448136 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
SNHG16-201ENST00000448136 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
SNHG16-201ENST00000448136 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
SNHG16-201ENST00000448136 WIZO95785 1651 aa15.11■□□□□ 0.01
SNHG16-201ENST00000448136 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
SNHG16-201ENST00000448136 ABCC8Q09428 1581 aa15.06■□□□□ 0
SNHG16-201ENST00000448136 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
SNHG16-201ENST00000448136 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
SNHG16-201ENST00000448136 CEP162Q5TB80 1403 aa15.02■□□□□ -0
SNHG16-201ENST00000448136 RUSC2Q8N2Y8 1516 aa15.02■□□□□ -0
SNHG16-201ENST00000448136 SOGA1O94964 1423 aa15.02□□□□□ -0.01
SNHG16-201ENST00000448136 BCANQ96GW7 911 aa15.01□□□□□ -0.01
SNHG16-201ENST00000448136 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
SNHG16-201ENST00000448136 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
SNHG16-201ENST00000448136 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
SNHG16-201ENST00000448136 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.016e-8■■□□□ 11.5
SNHG16-201ENST00000448136 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
SNHG16-201ENST00000448136 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
SNHG16-201ENST00000448136 KCNH8Q96L42 1107 aa14.91□□□□□ -0.02
SNHG16-201ENST00000448136 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
SNHG16-201ENST00000448136 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
SNHG16-201ENST00000448136 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
SNHG16-201ENST00000448136 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
SNHG16-201ENST00000448136 NACADO15069 1562 aa14.76□□□□□ -0.05
SNHG16-201ENST00000448136 ITGAEP38570 1179 aa14.74□□□□□ -0.05
SNHG16-201ENST00000448136 FKBP8Q14318 412 aa14.66□□□□□ -0.06
SNHG16-201ENST00000448136 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
SNHG16-201ENST00000448136 DHX57Q6P158 1386 aaKnown RBP14.64□□□□□ -0.07
SNHG16-201ENST00000448136 CLIP1P30622 1438 aa14.63□□□□□ -0.07
SNHG16-201ENST00000448136 GOLGA3Q08378 1498 aa14.61□□□□□ -0.07
SNHG16-201ENST00000448136 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
SNHG16-201ENST00000448136 RBM19Q9Y4C8 960 aaKnown RBP14.58□□□□□ -0.08
SNHG16-201ENST00000448136 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
SNHG16-201ENST00000448136 MSH5O43196 834 aa14.56□□□□□ -0.08
SNHG16-201ENST00000448136 RAPGEF2Q9Y4G8 1499 aa14.54□□□□□ -0.08
SNHG16-201ENST00000448136 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
SNHG16-201ENST00000448136 PRKCSHP14314 528 aaPredicted RBP14.53□□□□□ -0.08
SNHG16-201ENST00000448136 VPS8Q8N3P4 1428 aa14.52□□□□□ -0.08
SNHG16-201ENST00000448136 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
SNHG16-201ENST00000448136 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
SNHG16-201ENST00000448136 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
SNHG16-201ENST00000448136 ADRA2BP18089 450 aa14.49□□□□□ -0.09
SNHG16-201ENST00000448136 KIF21BO75037 1637 aa14.49□□□□□ -0.09
SNHG16-201ENST00000448136 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
SNHG16-201ENST00000448136 DDX10Q13206 875 aaKnown RBP14.46□□□□□ -0.1
SNHG16-201ENST00000448136 EEA1Q15075 1411 aa14.44□□□□□ -0.1
SNHG16-201ENST00000448136 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
SNHG16-201ENST00000448136 APLP2Q06481 763 aa14.42□□□□□ -0.1
SNHG16-201ENST00000448136 SIN3AQ96ST3 1273 aa14.4□□□□□ -0.1
SNHG16-201ENST00000448136 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
SNHG16-201ENST00000448136 ERICH6Q7L0X2 663 aa14.38□□□□□ -0.11
SNHG16-201ENST00000448136 NEFLP07196 543 aa14.36□□□□□ -0.11
SNHG16-201ENST00000448136 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
SNHG16-201ENST00000448136 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
SNHG16-201ENST00000448136 ANO8Q9HCE9 1232 aaPredicted RBP14.35□□□□□ -0.11
SNHG16-201ENST00000448136 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
SNHG16-201ENST00000448136 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.11
SNHG16-201ENST00000448136 NBR1Q14596 966 aa14.32□□□□□ -0.12
SNHG16-201ENST00000448136 PPP1R15AO75807 674 aaPredicted RBP14.3□□□□□ -0.12
SNHG16-201ENST00000448136 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
SNHG16-201ENST00000448136 RAB3GAP2Q9H2M9 1393 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms