RNA–Protein interactions for RNA: ENST00000590435.5

SNHG16-207, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 5 BASIC

Gene SNHG16, Length 1,947 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-207ENST00000590435 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
SNHG16-207ENST00000590435 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
SNHG16-207ENST00000590435 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
SNHG16-207ENST00000590435 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
SNHG16-207ENST00000590435 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
SNHG16-207ENST00000590435 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
SNHG16-207ENST00000590435 ABCC9O60706 1549 aa19.02■□□□□ 0.63
SNHG16-207ENST00000590435 ZCCHC6Q5VYS8 1495 aaKnown RBP18.91■□□□□ 0.62
SNHG16-207ENST00000590435 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
SNHG16-207ENST00000590435 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
SNHG16-207ENST00000590435 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
SNHG16-207ENST00000590435 NACADO15069 1562 aa18.49■□□□□ 0.55
SNHG16-207ENST00000590435 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
SNHG16-207ENST00000590435 FOXD1Q16676 465 aa18.26■□□□□ 0.51
SNHG16-207ENST00000590435 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
SNHG16-207ENST00000590435 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
SNHG16-207ENST00000590435 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
SNHG16-207ENST00000590435 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNHG16-207ENST00000590435 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
SNHG16-207ENST00000590435 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
SNHG16-207ENST00000590435 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
SNHG16-207ENST00000590435 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
SNHG16-207ENST00000590435 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
SNHG16-207ENST00000590435 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
SNHG16-207ENST00000590435 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
SNHG16-207ENST00000590435 SMARCA4P51532 1647 aa17.39■□□□□ 0.37
SNHG16-207ENST00000590435 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
SNHG16-207ENST00000590435 WIZO95785 1651 aa17.25■□□□□ 0.35
SNHG16-207ENST00000590435 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
SNHG16-207ENST00000590435 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
SNHG16-207ENST00000590435 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
SNHG16-207ENST00000590435 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
SNHG16-207ENST00000590435 MSH5O43196 834 aa17.15■□□□□ 0.34
SNHG16-207ENST00000590435 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
SNHG16-207ENST00000590435 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
SNHG16-207ENST00000590435 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.33
SNHG16-207ENST00000590435 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
SNHG16-207ENST00000590435 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
SNHG16-207ENST00000590435 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
SNHG16-207ENST00000590435 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SNHG16-207ENST00000590435 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
SNHG16-207ENST00000590435 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
SNHG16-207ENST00000590435 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
SNHG16-207ENST00000590435 CFTRP13569 1480 aa16.65■□□□□ 0.26
SNHG16-207ENST00000590435 NESP48681 1621 aa16.61■□□□□ 0.25
SNHG16-207ENST00000590435 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
SNHG16-207ENST00000590435 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
SNHG16-207ENST00000590435 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
SNHG16-207ENST00000590435 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
SNHG16-207ENST00000590435 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
SNHG16-207ENST00000590435 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
SNHG16-207ENST00000590435 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.216e-8■■□□□ 11.5
SNHG16-207ENST00000590435 CEP164Q9UPV0 1460 aa16.37■□□□□ 0.21
SNHG16-207ENST00000590435 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
SNHG16-207ENST00000590435 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
SNHG16-207ENST00000590435 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
SNHG16-207ENST00000590435 CUX1P39880 1505 aa16.32■□□□□ 0.2
SNHG16-207ENST00000590435 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
SNHG16-207ENST00000590435 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
SNHG16-207ENST00000590435 TOP2BQ02880 1626 aa16.27■□□□□ 0.19
SNHG16-207ENST00000590435 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
SNHG16-207ENST00000590435 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
SNHG16-207ENST00000590435 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
SNHG16-207ENST00000590435 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
SNHG16-207ENST00000590435 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
SNHG16-207ENST00000590435 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
SNHG16-207ENST00000590435 WDR62O43379 1518 aa16.18■□□□□ 0.18
SNHG16-207ENST00000590435 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SNHG16-207ENST00000590435 SOGA1O94964 1423 aa16.13■□□□□ 0.17
SNHG16-207ENST00000590435 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
SNHG16-207ENST00000590435 CUX2O14529 1486 aa16.09■□□□□ 0.17
SNHG16-207ENST00000590435 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
SNHG16-207ENST00000590435 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
SNHG16-207ENST00000590435 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
SNHG16-207ENST00000590435 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.15
SNHG16-207ENST00000590435 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
SNHG16-207ENST00000590435 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
SNHG16-207ENST00000590435 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
SNHG16-207ENST00000590435 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
SNHG16-207ENST00000590435 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
SNHG16-207ENST00000590435 EEA1Q15075 1411 aa15.96■□□□□ 0.15
SNHG16-207ENST00000590435 AQRO60306 1485 aaKnown RBP eCLIP15.94■□□□□ 0.145e-10■■■■□ 19.4
SNHG16-207ENST00000590435 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
SNHG16-207ENST00000590435 IGF1RP08069 1367 aa15.91■□□□□ 0.14
SNHG16-207ENST00000590435 ABCA5Q8WWZ7 1642 aa15.91■□□□□ 0.14
SNHG16-207ENST00000590435 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
SNHG16-207ENST00000590435 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
SNHG16-207ENST00000590435 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
SNHG16-207ENST00000590435 EIF4G3O43432 1585 aaKnown RBP15.86■□□□□ 0.13
SNHG16-207ENST00000590435 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
SNHG16-207ENST00000590435 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
SNHG16-207ENST00000590435 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
SNHG16-207ENST00000590435 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
SNHG16-207ENST00000590435 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
SNHG16-207ENST00000590435 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
SNHG16-207ENST00000590435 KIF21BO75037 1637 aa15.77■□□□□ 0.12
SNHG16-207ENST00000590435 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
SNHG16-207ENST00000590435 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SNHG16-207ENST00000590435 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
SNHG16-207ENST00000590435 CUL7Q14999 1698 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms