RNA–Protein interactions for RNA: ENST00000455726.5

EWSR1-214, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-214ENST00000455726 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
EWSR1-214ENST00000455726 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
EWSR1-214ENST00000455726 ABCC9O60706 1549 aa15□□□□□ -0.01
EWSR1-214ENST00000455726 NACADO15069 1562 aa14.54□□□□□ -0.08
EWSR1-214ENST00000455726 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
EWSR1-214ENST00000455726 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
EWSR1-214ENST00000455726 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
EWSR1-214ENST00000455726 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
EWSR1-214ENST00000455726 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
EWSR1-214ENST00000455726 ZCCHC6Q5VYS8 1495 aaKnown RBP14.29□□□□□ -0.12
EWSR1-214ENST00000455726 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
EWSR1-214ENST00000455726 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
EWSR1-214ENST00000455726 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
EWSR1-214ENST00000455726 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
EWSR1-214ENST00000455726 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
EWSR1-214ENST00000455726 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
EWSR1-214ENST00000455726 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
EWSR1-214ENST00000455726 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
EWSR1-214ENST00000455726 CC2D2AQ9P2K1 1620 aa13.58□□□□□ -0.24
EWSR1-214ENST00000455726 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
EWSR1-214ENST00000455726 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
EWSR1-214ENST00000455726 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
EWSR1-214ENST00000455726 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
EWSR1-214ENST00000455726 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
EWSR1-214ENST00000455726 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
EWSR1-214ENST00000455726 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
EWSR1-214ENST00000455726 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
EWSR1-214ENST00000455726 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
EWSR1-214ENST00000455726 MROH2BQ7Z745 1585 aa13.17□□□□□ -0.3
EWSR1-214ENST00000455726 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
EWSR1-214ENST00000455726 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
EWSR1-214ENST00000455726 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
EWSR1-214ENST00000455726 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
EWSR1-214ENST00000455726 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
EWSR1-214ENST00000455726 CUX2O14529 1486 aa13□□□□□ -0.33
EWSR1-214ENST00000455726 WIZO95785 1651 aa12.99□□□□□ -0.33
EWSR1-214ENST00000455726 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
EWSR1-214ENST00000455726 CFTRP13569 1480 aa12.9□□□□□ -0.34
EWSR1-214ENST00000455726 NESP48681 1621 aa12.89□□□□□ -0.35
EWSR1-214ENST00000455726 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
EWSR1-214ENST00000455726 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
EWSR1-214ENST00000455726 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
EWSR1-214ENST00000455726 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
EWSR1-214ENST00000455726 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
EWSR1-214ENST00000455726 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
EWSR1-214ENST00000455726 WDR62O43379 1518 aa12.72□□□□□ -0.37
EWSR1-214ENST00000455726 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
EWSR1-214ENST00000455726 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
EWSR1-214ENST00000455726 SUPT5HO00267 1087 aaKnown RBP12.69□□□□□ -0.38
EWSR1-214ENST00000455726 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
EWSR1-214ENST00000455726 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
EWSR1-214ENST00000455726 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
EWSR1-214ENST00000455726 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
EWSR1-214ENST00000455726 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
EWSR1-214ENST00000455726 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
EWSR1-214ENST00000455726 SOGA1O94964 1423 aa12.48□□□□□ -0.41
EWSR1-214ENST00000455726 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
EWSR1-214ENST00000455726 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-214ENST00000455726 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
EWSR1-214ENST00000455726 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
EWSR1-214ENST00000455726 FGD5Q6ZNL6 1462 aa12.38□□□□□ -0.43
EWSR1-214ENST00000455726 CUX1P39880 1505 aa12.37□□□□□ -0.43
EWSR1-214ENST00000455726 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
EWSR1-214ENST00000455726 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.432e-7■■■■□ 21.3
EWSR1-214ENST00000455726 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
EWSR1-214ENST00000455726 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
EWSR1-214ENST00000455726 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
EWSR1-214ENST00000455726 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
EWSR1-214ENST00000455726 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
EWSR1-214ENST00000455726 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
EWSR1-214ENST00000455726 FBLN2P98095 1184 aa12.32□□□□□ -0.44
EWSR1-214ENST00000455726 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
EWSR1-214ENST00000455726 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
EWSR1-214ENST00000455726 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
EWSR1-214ENST00000455726 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
EWSR1-214ENST00000455726 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.44
EWSR1-214ENST00000455726 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
EWSR1-214ENST00000455726 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
EWSR1-214ENST00000455726 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
EWSR1-214ENST00000455726 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
EWSR1-214ENST00000455726 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
EWSR1-214ENST00000455726 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
EWSR1-214ENST00000455726 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
EWSR1-214ENST00000455726 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
EWSR1-214ENST00000455726 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
EWSR1-214ENST00000455726 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
EWSR1-214ENST00000455726 CHD1O14646 1710 aa12.13□□□□□ -0.47
EWSR1-214ENST00000455726 GRIN2AQ12879 1464 aa12.13□□□□□ -0.47
EWSR1-214ENST00000455726 IGF1RP08069 1367 aa12.12□□□□□ -0.47
EWSR1-214ENST00000455726 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
EWSR1-214ENST00000455726 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
EWSR1-214ENST00000455726 NUP160Q12769 1436 aa12.09□□□□□ -0.47
EWSR1-214ENST00000455726 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
EWSR1-214ENST00000455726 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
EWSR1-214ENST00000455726 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
EWSR1-214ENST00000455726 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
EWSR1-214ENST00000455726 JPH4Q96JJ6 628 aa12.07□□□□□ -0.48
EWSR1-214ENST00000455726 CARMIL1Q5VZK9 1371 aa12.06□□□□□ -0.48
EWSR1-214ENST00000455726 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
EWSR1-214ENST00000455726 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms