RNA–Protein interactions for RNA: ENST00000404034.5

BRD1-202, Transcript of bromodomain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRD1, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-202ENST00000404034 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
BRD1-202ENST00000404034 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
BRD1-202ENST00000404034 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
BRD1-202ENST00000404034 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
BRD1-202ENST00000404034 ABCC9O60706 1549 aa20.54■□□□□ 0.88
BRD1-202ENST00000404034 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
BRD1-202ENST00000404034 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
BRD1-202ENST00000404034 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.761e-8■□□□□ 9.4
BRD1-202ENST00000404034 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
BRD1-202ENST00000404034 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
BRD1-202ENST00000404034 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
BRD1-202ENST00000404034 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
BRD1-202ENST00000404034 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
BRD1-202ENST00000404034 LOC105371045A0A1W2PR82 267 aa19.21■□□□□ 0.67
BRD1-202ENST00000404034 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
BRD1-202ENST00000404034 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
BRD1-202ENST00000404034 HRCP23327 699 aa19.08■□□□□ 0.65
BRD1-202ENST00000404034 NACADO15069 1562 aa19.02■□□□□ 0.64
BRD1-202ENST00000404034 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
BRD1-202ENST00000404034 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
BRD1-202ENST00000404034 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
BRD1-202ENST00000404034 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
BRD1-202ENST00000404034 APLP2Q06481 763 aa18.88■□□□□ 0.61
BRD1-202ENST00000404034 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
BRD1-202ENST00000404034 ZEB1P37275 1124 aaPredicted RBP18.84■□□□□ 0.61
BRD1-202ENST00000404034 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
BRD1-202ENST00000404034 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
BRD1-202ENST00000404034 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
BRD1-202ENST00000404034 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
BRD1-202ENST00000404034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
BRD1-202ENST00000404034 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
BRD1-202ENST00000404034 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
BRD1-202ENST00000404034 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
BRD1-202ENST00000404034 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
BRD1-202ENST00000404034 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
BRD1-202ENST00000404034 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
BRD1-202ENST00000404034 ITGAEP38570 1179 aa18.23■□□□□ 0.51
BRD1-202ENST00000404034 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
BRD1-202ENST00000404034 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
BRD1-202ENST00000404034 FBLN2P98095 1184 aa18.12■□□□□ 0.49
BRD1-202ENST00000404034 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
BRD1-202ENST00000404034 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
BRD1-202ENST00000404034 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
BRD1-202ENST00000404034 GTF3C3Q9Y5Q9 886 aa17.91■□□□□ 0.46
BRD1-202ENST00000404034 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
BRD1-202ENST00000404034 SMARCA2P51531 1590 aa17.84■□□□□ 0.45
BRD1-202ENST00000404034 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
BRD1-202ENST00000404034 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
BRD1-202ENST00000404034 NEFLP07196 543 aa17.82■□□□□ 0.44
BRD1-202ENST00000404034 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
BRD1-202ENST00000404034 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
BRD1-202ENST00000404034 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
BRD1-202ENST00000404034 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
BRD1-202ENST00000404034 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
BRD1-202ENST00000404034 ACIN1Q9UKV3 1341 aaKnown RBP17.74■□□□□ 0.43
BRD1-202ENST00000404034 CNGB1Q14028 1251 aaPredicted RBP17.72■□□□□ 0.43
BRD1-202ENST00000404034 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
BRD1-202ENST00000404034 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.42
BRD1-202ENST00000404034 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
BRD1-202ENST00000404034 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
BRD1-202ENST00000404034 NCAPD3P42695 1498 aa17.64■□□□□ 0.42
BRD1-202ENST00000404034 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
BRD1-202ENST00000404034 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
BRD1-202ENST00000404034 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
BRD1-202ENST00000404034 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
BRD1-202ENST00000404034 P3H3Q8IVL6 736 aa17.58■□□□□ 0.41
BRD1-202ENST00000404034 BCANQ96GW7 911 aa17.58■□□□□ 0.4
BRD1-202ENST00000404034 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
BRD1-202ENST00000404034 MYT1Q01538 1121 aa17.48■□□□□ 0.39
BRD1-202ENST00000404034 WIZO95785 1651 aa17.44■□□□□ 0.38
BRD1-202ENST00000404034 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
BRD1-202ENST00000404034 MIER1Q8N108 512 aa17.42■□□□□ 0.38
BRD1-202ENST00000404034 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
BRD1-202ENST00000404034 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
BRD1-202ENST00000404034 NESP48681 1621 aa17.41■□□□□ 0.38
BRD1-202ENST00000404034 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
BRD1-202ENST00000404034 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
BRD1-202ENST00000404034 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
BRD1-202ENST00000404034 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
BRD1-202ENST00000404034 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
BRD1-202ENST00000404034 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
BRD1-202ENST00000404034 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
BRD1-202ENST00000404034 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
BRD1-202ENST00000404034 ANP32CO43423 234 aa17.3■□□□□ 0.36
BRD1-202ENST00000404034 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
BRD1-202ENST00000404034 CLIP1P30622 1438 aa17.29■□□□□ 0.36
BRD1-202ENST00000404034 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
BRD1-202ENST00000404034 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
BRD1-202ENST00000404034 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
BRD1-202ENST00000404034 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
BRD1-202ENST00000404034 SOGA1O94964 1423 aa17.25■□□□□ 0.35
BRD1-202ENST00000404034 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
BRD1-202ENST00000404034 TNIKQ9UKE5 1360 aa17.19■□□□□ 0.34
BRD1-202ENST00000404034 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
BRD1-202ENST00000404034 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
BRD1-202ENST00000404034 FKBP8Q14318 412 aa17.16■□□□□ 0.34
BRD1-202ENST00000404034 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
BRD1-202ENST00000404034 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
BRD1-202ENST00000404034 CFTRP13569 1480 aa17.1■□□□□ 0.33
BRD1-202ENST00000404034 CUX2O14529 1486 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms