RNA–Protein interactions for RNA: ENST00000513349.5

DROSHA-220, Transcript of drosha ribonuclease III, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DROSHA, Length 4,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-220ENST00000513349 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.12
DROSHA-220ENST00000513349 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
DROSHA-220ENST00000513349 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
DROSHA-220ENST00000513349 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
DROSHA-220ENST00000513349 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
DROSHA-220ENST00000513349 PCGF6Q9BYE7 350 aa14.43□□□□□ -0.1
DROSHA-220ENST00000513349 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
DROSHA-220ENST00000513349 HRCP23327 699 aa14.3□□□□□ -0.12
DROSHA-220ENST00000513349 MYT1Q01538 1121 aa14.18□□□□□ -0.14
DROSHA-220ENST00000513349 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
DROSHA-220ENST00000513349 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
DROSHA-220ENST00000513349 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
DROSHA-220ENST00000513349 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
DROSHA-220ENST00000513349 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
DROSHA-220ENST00000513349 TRIM41Q8WV44 630 aa13.88□□□□□ -0.19
DROSHA-220ENST00000513349 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
DROSHA-220ENST00000513349 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
DROSHA-220ENST00000513349 APLP2Q06481 763 aa13.78□□□□□ -0.2
DROSHA-220ENST00000513349 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
DROSHA-220ENST00000513349 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
DROSHA-220ENST00000513349 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
DROSHA-220ENST00000513349 YTHDC1Q96MU7 727 aaKnown RBP13.5□□□□□ -0.25
DROSHA-220ENST00000513349 UBTFP17480 764 aaKnown RBP13.45□□□□□ -0.26
DROSHA-220ENST00000513349 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
DROSHA-220ENST00000513349 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
DROSHA-220ENST00000513349 NEFLP07196 543 aa13.4□□□□□ -0.26
DROSHA-220ENST00000513349 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
DROSHA-220ENST00000513349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
DROSHA-220ENST00000513349 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
DROSHA-220ENST00000513349 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
DROSHA-220ENST00000513349 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
DROSHA-220ENST00000513349 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
DROSHA-220ENST00000513349 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
DROSHA-220ENST00000513349 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
DROSHA-220ENST00000513349 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
DROSHA-220ENST00000513349 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
DROSHA-220ENST00000513349 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
DROSHA-220ENST00000513349 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
DROSHA-220ENST00000513349 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
DROSHA-220ENST00000513349 ITGAEP38570 1179 aa12.91□□□□□ -0.34
DROSHA-220ENST00000513349 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
DROSHA-220ENST00000513349 ANP32CO43423 234 aa12.8□□□□□ -0.36
DROSHA-220ENST00000513349 BCANQ96GW7 911 aa12.8□□□□□ -0.36
DROSHA-220ENST00000513349 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
DROSHA-220ENST00000513349 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
DROSHA-220ENST00000513349 MIER1Q8N108 512 aa12.76□□□□□ -0.37
DROSHA-220ENST00000513349 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
DROSHA-220ENST00000513349 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
DROSHA-220ENST00000513349 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
DROSHA-220ENST00000513349 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
DROSHA-220ENST00000513349 EEA1Q15075 1411 aa12.7□□□□□ -0.38
DROSHA-220ENST00000513349 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
DROSHA-220ENST00000513349 FKBP8Q14318 412 aa12.67□□□□□ -0.38
DROSHA-220ENST00000513349 CEP162Q5TB80 1403 aa12.65□□□□□ -0.39
DROSHA-220ENST00000513349 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
DROSHA-220ENST00000513349 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
DROSHA-220ENST00000513349 ABCC9O60706 1549 aa12.63□□□□□ -0.39
DROSHA-220ENST00000513349 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
DROSHA-220ENST00000513349 POLR3GLQ9BT43 218 aa12.58□□□□□ -0.4
DROSHA-220ENST00000513349 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
DROSHA-220ENST00000513349 CLIP1P30622 1438 aa12.56□□□□□ -0.4
DROSHA-220ENST00000513349 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
DROSHA-220ENST00000513349 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
DROSHA-220ENST00000513349 SUPT16HQ9Y5B9 1047 aaKnown RBP12.51□□□□□ -0.41
DROSHA-220ENST00000513349 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
DROSHA-220ENST00000513349 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
DROSHA-220ENST00000513349 HNRNPUQ00839 825 aaKnown RBP eCLIP12.48□□□□□ -0.41
DROSHA-220ENST00000513349 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
DROSHA-220ENST00000513349 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
DROSHA-220ENST00000513349 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.428e-7■■■■□ 19.7
DROSHA-220ENST00000513349 WRNQ14191 1432 aaPredicted RBP eCLIP12.39□□□□□ -0.43
DROSHA-220ENST00000513349 NACADO15069 1562 aa12.37□□□□□ -0.43
DROSHA-220ENST00000513349 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
DROSHA-220ENST00000513349 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
DROSHA-220ENST00000513349 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
DROSHA-220ENST00000513349 TIMELESSQ9UNS1 1208 aa12.32□□□□□ -0.44
DROSHA-220ENST00000513349 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
DROSHA-220ENST00000513349 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
DROSHA-220ENST00000513349 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
DROSHA-220ENST00000513349 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
DROSHA-220ENST00000513349 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
DROSHA-220ENST00000513349 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
DROSHA-220ENST00000513349 P3H3Q8IVL6 736 aa12.29□□□□□ -0.44
DROSHA-220ENST00000513349 SOGA1O94964 1423 aa12.29□□□□□ -0.44
DROSHA-220ENST00000513349 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
DROSHA-220ENST00000513349 NBR1Q14596 966 aa12.28□□□□□ -0.44
DROSHA-220ENST00000513349 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
DROSHA-220ENST00000513349 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
DROSHA-220ENST00000513349 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
DROSHA-220ENST00000513349 PPP4R2Q9NY27 417 aa12.26□□□□□ -0.45
DROSHA-220ENST00000513349 CCNB3Q8WWL7 1395 aa12.25□□□□□ -0.45
DROSHA-220ENST00000513349 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
DROSHA-220ENST00000513349 MROH2BQ7Z745 1585 aa12.24□□□□□ -0.45
DROSHA-220ENST00000513349 ERICH6BQ5W0A0 696 aa12.24□□□□□ -0.45
DROSHA-220ENST00000513349 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
DROSHA-220ENST00000513349 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
DROSHA-220ENST00000513349 HIRIP3Q9BW71 556 aaPredicted RBP12.21□□□□□ -0.46
DROSHA-220ENST00000513349 TMC1Q8TDI8 760 aa12.19□□□□□ -0.46
DROSHA-220ENST00000513349 KIF27Q86VH2 1401 aa12.19□□□□□ -0.46
DROSHA-220ENST00000513349 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms