RNA–Protein interactions for RNA: ENST00000493536.5

SNHG16-202, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best)

Gene SNHG16, Length 2,424 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-202ENST00000493536 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
SNHG16-202ENST00000493536 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
SNHG16-202ENST00000493536 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
SNHG16-202ENST00000493536 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
SNHG16-202ENST00000493536 ABCC9O60706 1549 aa16.35■□□□□ 0.21
SNHG16-202ENST00000493536 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
SNHG16-202ENST00000493536 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
SNHG16-202ENST00000493536 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
SNHG16-202ENST00000493536 NACADO15069 1562 aa16.06■□□□□ 0.16
SNHG16-202ENST00000493536 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
SNHG16-202ENST00000493536 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
SNHG16-202ENST00000493536 SUPT5HO00267 1087 aaKnown RBP15.65■□□□□ 0.1
SNHG16-202ENST00000493536 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
SNHG16-202ENST00000493536 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNHG16-202ENST00000493536 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
SNHG16-202ENST00000493536 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
SNHG16-202ENST00000493536 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
SNHG16-202ENST00000493536 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
SNHG16-202ENST00000493536 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
SNHG16-202ENST00000493536 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
SNHG16-202ENST00000493536 WIZO95785 1651 aa15.18■□□□□ 0.02
SNHG16-202ENST00000493536 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
SNHG16-202ENST00000493536 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
SNHG16-202ENST00000493536 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
SNHG16-202ENST00000493536 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
SNHG16-202ENST00000493536 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
SNHG16-202ENST00000493536 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
SNHG16-202ENST00000493536 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
SNHG16-202ENST00000493536 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
SNHG16-202ENST00000493536 NCAPD3P42695 1498 aa14.81□□□□□ -0.04
SNHG16-202ENST00000493536 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
SNHG16-202ENST00000493536 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.05
SNHG16-202ENST00000493536 TRIM41Q8WV44 630 aa14.71□□□□□ -0.06
SNHG16-202ENST00000493536 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
SNHG16-202ENST00000493536 CFTRP13569 1480 aa14.49□□□□□ -0.09
SNHG16-202ENST00000493536 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.096e-8■■□□□ 11.5
SNHG16-202ENST00000493536 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
SNHG16-202ENST00000493536 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
SNHG16-202ENST00000493536 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
SNHG16-202ENST00000493536 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
SNHG16-202ENST00000493536 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
SNHG16-202ENST00000493536 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
SNHG16-202ENST00000493536 NESP48681 1621 aa14.34□□□□□ -0.11
SNHG16-202ENST00000493536 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
SNHG16-202ENST00000493536 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
SNHG16-202ENST00000493536 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
SNHG16-202ENST00000493536 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
SNHG16-202ENST00000493536 SOGA1O94964 1423 aa14.3□□□□□ -0.12
SNHG16-202ENST00000493536 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
SNHG16-202ENST00000493536 CUX1P39880 1505 aa14.29□□□□□ -0.12
SNHG16-202ENST00000493536 EEA1Q15075 1411 aa14.27□□□□□ -0.13
SNHG16-202ENST00000493536 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
SNHG16-202ENST00000493536 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
SNHG16-202ENST00000493536 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
SNHG16-202ENST00000493536 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
SNHG16-202ENST00000493536 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
SNHG16-202ENST00000493536 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
SNHG16-202ENST00000493536 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
SNHG16-202ENST00000493536 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
SNHG16-202ENST00000493536 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
SNHG16-202ENST00000493536 URB2Q14146 1524 aaKnown RBP14.11□□□□□ -0.15
SNHG16-202ENST00000493536 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
SNHG16-202ENST00000493536 CUX2O14529 1486 aa14.08□□□□□ -0.15
SNHG16-202ENST00000493536 GOLGA3Q08378 1498 aa14.08□□□□□ -0.15
SNHG16-202ENST00000493536 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
SNHG16-202ENST00000493536 KIF21BO75037 1637 aa14.06□□□□□ -0.16
SNHG16-202ENST00000493536 ERCC6Q03468 1493 aa14.05□□□□□ -0.16
SNHG16-202ENST00000493536 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
SNHG16-202ENST00000493536 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
SNHG16-202ENST00000493536 TNIKQ9UKE5 1360 aa14.03□□□□□ -0.16
SNHG16-202ENST00000493536 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
SNHG16-202ENST00000493536 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
SNHG16-202ENST00000493536 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
SNHG16-202ENST00000493536 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
SNHG16-202ENST00000493536 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
SNHG16-202ENST00000493536 IGF1RP08069 1367 aa13.97□□□□□ -0.17
SNHG16-202ENST00000493536 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
SNHG16-202ENST00000493536 WDR62O43379 1518 aa13.94□□□□□ -0.18
SNHG16-202ENST00000493536 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
SNHG16-202ENST00000493536 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
SNHG16-202ENST00000493536 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
SNHG16-202ENST00000493536 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
SNHG16-202ENST00000493536 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
SNHG16-202ENST00000493536 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
SNHG16-202ENST00000493536 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
SNHG16-202ENST00000493536 CLIP1P30622 1438 aa13.87□□□□□ -0.19
SNHG16-202ENST00000493536 CUL7Q14999 1698 aa13.87□□□□□ -0.19
SNHG16-202ENST00000493536 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
SNHG16-202ENST00000493536 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.25e-10■■■■□ 19.4
SNHG16-202ENST00000493536 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
SNHG16-202ENST00000493536 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
SNHG16-202ENST00000493536 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
SNHG16-202ENST00000493536 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
SNHG16-202ENST00000493536 PPARGC1BQ86YN6 1023 aaKnown RBP13.75□□□□□ -0.21
SNHG16-202ENST00000493536 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
SNHG16-202ENST00000493536 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
SNHG16-202ENST00000493536 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
SNHG16-202ENST00000493536 VPS8Q8N3P4 1428 aa13.74□□□□□ -0.21
SNHG16-202ENST00000493536 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
SNHG16-202ENST00000493536 CTTNBP2Q8WZ74 1663 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms