RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 NISCHQ9Y2I1 1504 aa27.51■■■□□ 2
SNHG16-208ENST00000591956 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
SNHG16-208ENST00000591956 ABCC9O60706 1549 aa24.07■■□□□ 1.44
SNHG16-208ENST00000591956 NACADO15069 1562 aa23.01■■□□□ 1.27
SNHG16-208ENST00000591956 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
SNHG16-208ENST00000591956 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
SNHG16-208ENST00000591956 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
SNHG16-208ENST00000591956 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.25
SNHG16-208ENST00000591956 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
SNHG16-208ENST00000591956 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
SNHG16-208ENST00000591956 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
SNHG16-208ENST00000591956 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
SNHG16-208ENST00000591956 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
SNHG16-208ENST00000591956 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
SNHG16-208ENST00000591956 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
SNHG16-208ENST00000591956 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
SNHG16-208ENST00000591956 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
SNHG16-208ENST00000591956 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
SNHG16-208ENST00000591956 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
SNHG16-208ENST00000591956 SMARCA4P51532 1647 aa21.29■■□□□ 1
SNHG16-208ENST00000591956 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
SNHG16-208ENST00000591956 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
SNHG16-208ENST00000591956 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
SNHG16-208ENST00000591956 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
SNHG16-208ENST00000591956 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.97
SNHG16-208ENST00000591956 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
SNHG16-208ENST00000591956 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
SNHG16-208ENST00000591956 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
SNHG16-208ENST00000591956 WIZO95785 1651 aa20.89■□□□□ 0.93
SNHG16-208ENST00000591956 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
SNHG16-208ENST00000591956 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
SNHG16-208ENST00000591956 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
SNHG16-208ENST00000591956 CUX2O14529 1486 aa20.69■□□□□ 0.9
SNHG16-208ENST00000591956 NESP48681 1621 aa20.67■□□□□ 0.9
SNHG16-208ENST00000591956 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
SNHG16-208ENST00000591956 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
SNHG16-208ENST00000591956 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
SNHG16-208ENST00000591956 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
SNHG16-208ENST00000591956 CFTRP13569 1480 aa20.5■□□□□ 0.87
SNHG16-208ENST00000591956 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
SNHG16-208ENST00000591956 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
SNHG16-208ENST00000591956 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
SNHG16-208ENST00000591956 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
SNHG16-208ENST00000591956 PRDM2Q13029 1718 aa20.27■□□□□ 0.83
SNHG16-208ENST00000591956 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
SNHG16-208ENST00000591956 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
SNHG16-208ENST00000591956 WDR62O43379 1518 aa20.18■□□□□ 0.82
SNHG16-208ENST00000591956 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
SNHG16-208ENST00000591956 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
SNHG16-208ENST00000591956 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
SNHG16-208ENST00000591956 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
SNHG16-208ENST00000591956 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
SNHG16-208ENST00000591956 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
SNHG16-208ENST00000591956 CUX1P39880 1505 aa19.82■□□□□ 0.76
SNHG16-208ENST00000591956 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
SNHG16-208ENST00000591956 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
SNHG16-208ENST00000591956 SOGA1O94964 1423 aa19.79■□□□□ 0.76
SNHG16-208ENST00000591956 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
SNHG16-208ENST00000591956 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.756e-8■■□□□ 11.5
SNHG16-208ENST00000591956 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
SNHG16-208ENST00000591956 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
SNHG16-208ENST00000591956 WDR97A6NE52 1622 aa19.71■□□□□ 0.75
SNHG16-208ENST00000591956 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
SNHG16-208ENST00000591956 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
SNHG16-208ENST00000591956 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
SNHG16-208ENST00000591956 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
SNHG16-208ENST00000591956 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
SNHG16-208ENST00000591956 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.735e-10■■■■□ 19.4
SNHG16-208ENST00000591956 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
SNHG16-208ENST00000591956 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
SNHG16-208ENST00000591956 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
SNHG16-208ENST00000591956 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
SNHG16-208ENST00000591956 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
SNHG16-208ENST00000591956 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
SNHG16-208ENST00000591956 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
SNHG16-208ENST00000591956 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
SNHG16-208ENST00000591956 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
SNHG16-208ENST00000591956 FBLN2P98095 1184 aa19.47■□□□□ 0.71
SNHG16-208ENST00000591956 CHD1O14646 1710 aa19.47■□□□□ 0.71
SNHG16-208ENST00000591956 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
SNHG16-208ENST00000591956 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
SNHG16-208ENST00000591956 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
SNHG16-208ENST00000591956 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
SNHG16-208ENST00000591956 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
SNHG16-208ENST00000591956 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
SNHG16-208ENST00000591956 CYB5RLQ6IPT4 315 aa19.39■□□□□ 0.69
SNHG16-208ENST00000591956 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
SNHG16-208ENST00000591956 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
SNHG16-208ENST00000591956 IGF1RP08069 1367 aa19.33■□□□□ 0.69
SNHG16-208ENST00000591956 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
SNHG16-208ENST00000591956 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
SNHG16-208ENST00000591956 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
SNHG16-208ENST00000591956 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
SNHG16-208ENST00000591956 CUL7Q14999 1698 aa19.21■□□□□ 0.67
SNHG16-208ENST00000591956 NUP160Q12769 1436 aa19.21■□□□□ 0.67
SNHG16-208ENST00000591956 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
SNHG16-208ENST00000591956 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
SNHG16-208ENST00000591956 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
SNHG16-208ENST00000591956 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
SNHG16-208ENST00000591956 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms