RNA–Protein interactions for RNA: ENST00000512309.1

COPB2-210, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-210ENST00000512309 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
COPB2-210ENST00000512309 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
COPB2-210ENST00000512309 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
COPB2-210ENST00000512309 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
COPB2-210ENST00000512309 FOXD1Q16676 465 aa23.93■■□□□ 1.42
COPB2-210ENST00000512309 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
COPB2-210ENST00000512309 MSH5O43196 834 aa22.6■■□□□ 1.21
COPB2-210ENST00000512309 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
COPB2-210ENST00000512309 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
COPB2-210ENST00000512309 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
COPB2-210ENST00000512309 ADRA2BP18089 450 aa21.78■■□□□ 1.08
COPB2-210ENST00000512309 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
COPB2-210ENST00000512309 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
COPB2-210ENST00000512309 CACNB1Q02641 598 aaPredicted RBP19.86■□□□□ 0.77
COPB2-210ENST00000512309 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.77
COPB2-210ENST00000512309 DCAF8L1A6NGE4 600 aa19.45■□□□□ 0.7
COPB2-210ENST00000512309 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
COPB2-210ENST00000512309 HOXD11P31277 338 aaPredicted RBP19.13■□□□□ 0.65
COPB2-210ENST00000512309 PPP4R3CPQ6ZMV5 832 aa19.04■□□□□ 0.64
COPB2-210ENST00000512309 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
COPB2-210ENST00000512309 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
COPB2-210ENST00000512309 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
COPB2-210ENST00000512309 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
COPB2-210ENST00000512309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.526e-8■■■■□ 21.7
COPB2-210ENST00000512309 POTEHQ6S545 545 aa18.09■□□□□ 0.49
COPB2-210ENST00000512309 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
COPB2-210ENST00000512309 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
COPB2-210ENST00000512309 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
COPB2-210ENST00000512309 DSG3P32926 999 aa17.81■□□□□ 0.44
COPB2-210ENST00000512309 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
COPB2-210ENST00000512309 CAPN15O75808 1086 aa17.79■□□□□ 0.44
COPB2-210ENST00000512309 ABCB7O75027 752 aa17.35■□□□□ 0.37
COPB2-210ENST00000512309 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
COPB2-210ENST00000512309 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
COPB2-210ENST00000512309 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
COPB2-210ENST00000512309 APLP2Q06481 763 aa17.16■□□□□ 0.34
COPB2-210ENST00000512309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
COPB2-210ENST00000512309 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
COPB2-210ENST00000512309 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
COPB2-210ENST00000512309 KCNA4P22459 653 aa16.95■□□□□ 0.3
COPB2-210ENST00000512309 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
COPB2-210ENST00000512309 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
COPB2-210ENST00000512309 POLA2Q14181 598 aa16.7■□□□□ 0.26
COPB2-210ENST00000512309 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
COPB2-210ENST00000512309 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
COPB2-210ENST00000512309 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
COPB2-210ENST00000512309 PIP4P2Q8N4L2 257 aa16.38■□□□□ 0.21
COPB2-210ENST00000512309 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
COPB2-210ENST00000512309 HAX1O00165 279 aa16.27■□□□□ 0.2
COPB2-210ENST00000512309 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
COPB2-210ENST00000512309 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
COPB2-210ENST00000512309 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
COPB2-210ENST00000512309 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
COPB2-210ENST00000512309 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.178e-7■■■■■ 28.9
COPB2-210ENST00000512309 EVX2Q03828 476 aa16.04■□□□□ 0.16
COPB2-210ENST00000512309 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
COPB2-210ENST00000512309 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
COPB2-210ENST00000512309 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
COPB2-210ENST00000512309 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
COPB2-210ENST00000512309 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
COPB2-210ENST00000512309 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
COPB2-210ENST00000512309 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
COPB2-210ENST00000512309 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
COPB2-210ENST00000512309 GABBR2O75899 941 aa15.61■□□□□ 0.09
COPB2-210ENST00000512309 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
COPB2-210ENST00000512309 LHX8Q68G74 356 aa15.6■□□□□ 0.09
COPB2-210ENST00000512309 FBLN2P98095 1184 aa15.59■□□□□ 0.09
COPB2-210ENST00000512309 ZBTB22O15209 634 aa15.58■□□□□ 0.08
COPB2-210ENST00000512309 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
COPB2-210ENST00000512309 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
COPB2-210ENST00000512309 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
COPB2-210ENST00000512309 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
COPB2-210ENST00000512309 SSUH2Q9Y2M2 353 aa15.43■□□□□ 0.06
COPB2-210ENST00000512309 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
COPB2-210ENST00000512309 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
COPB2-210ENST00000512309 PLSCR2Q9NRY7 297 aa15.23■□□□□ 0.03
COPB2-210ENST00000512309 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
COPB2-210ENST00000512309 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
COPB2-210ENST00000512309 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
COPB2-210ENST00000512309 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
COPB2-210ENST00000512309 CLCN6P51797 869 aa15.01□□□□□ -0.01
COPB2-210ENST00000512309 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
COPB2-210ENST00000512309 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
COPB2-210ENST00000512309 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
COPB2-210ENST00000512309 GALR2O43603 387 aaPredicted RBP14.84□□□□□ -0.03
COPB2-210ENST00000512309 POTEB2H3BUK9 544 aa14.79□□□□□ -0.04
COPB2-210ENST00000512309 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
COPB2-210ENST00000512309 CREBZFQ9NS37 354 aa14.76□□□□□ -0.05
COPB2-210ENST00000512309 POTEMA6NI47 508 aa14.74□□□□□ -0.05
COPB2-210ENST00000512309 POTEGQ6S5H5 508 aa14.68□□□□□ -0.06
COPB2-210ENST00000512309 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
COPB2-210ENST00000512309 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
COPB2-210ENST00000512309 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
COPB2-210ENST00000512309 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
COPB2-210ENST00000512309 METRNQ9UJH8 293 aa14.49□□□□□ -0.09
COPB2-210ENST00000512309 POTEJP0CG39 1038 aa14.46□□□□□ -0.09
COPB2-210ENST00000512309 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
COPB2-210ENST00000512309 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
COPB2-210ENST00000512309 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
COPB2-210ENST00000512309 ASTLQ6HA08 431 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms