RNA–Protein interactions for RNA: ENST00000438393.5

BRD1-204, Transcript of bromodomain containing 1, humanhuman

TSL 2

Gene BRD1, Length 3,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-204ENST00000438393 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
BRD1-204ENST00000438393 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
BRD1-204ENST00000438393 ABCC9O60706 1549 aa24.87■■□□□ 1.57
BRD1-204ENST00000438393 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
BRD1-204ENST00000438393 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
BRD1-204ENST00000438393 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
BRD1-204ENST00000438393 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
BRD1-204ENST00000438393 NACADO15069 1562 aa23.81■■□□□ 1.4
BRD1-204ENST00000438393 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
BRD1-204ENST00000438393 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
BRD1-204ENST00000438393 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
BRD1-204ENST00000438393 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.361e-8■□□□□ 9.4
BRD1-204ENST00000438393 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
BRD1-204ENST00000438393 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
BRD1-204ENST00000438393 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
BRD1-204ENST00000438393 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
BRD1-204ENST00000438393 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
BRD1-204ENST00000438393 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
BRD1-204ENST00000438393 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
BRD1-204ENST00000438393 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
BRD1-204ENST00000438393 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
BRD1-204ENST00000438393 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
BRD1-204ENST00000438393 WIZO95785 1651 aa22.4■■□□□ 1.18
BRD1-204ENST00000438393 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
BRD1-204ENST00000438393 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
BRD1-204ENST00000438393 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
BRD1-204ENST00000438393 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
BRD1-204ENST00000438393 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
BRD1-204ENST00000438393 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
BRD1-204ENST00000438393 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
BRD1-204ENST00000438393 HRCP23327 699 aa21.94■■□□□ 1.1
BRD1-204ENST00000438393 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
BRD1-204ENST00000438393 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
BRD1-204ENST00000438393 NESP48681 1621 aa21.69■■□□□ 1.06
BRD1-204ENST00000438393 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
BRD1-204ENST00000438393 CFTRP13569 1480 aa21.49■■□□□ 1.03
BRD1-204ENST00000438393 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
BRD1-204ENST00000438393 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
BRD1-204ENST00000438393 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
BRD1-204ENST00000438393 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
BRD1-204ENST00000438393 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
BRD1-204ENST00000438393 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
BRD1-204ENST00000438393 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
BRD1-204ENST00000438393 ERCC6Q03468 1493 aa21.32■■□□□ 1
BRD1-204ENST00000438393 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
BRD1-204ENST00000438393 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
BRD1-204ENST00000438393 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
BRD1-204ENST00000438393 CEP164Q9UPV0 1460 aa21.24■□□□□ 0.99
BRD1-204ENST00000438393 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
BRD1-204ENST00000438393 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
BRD1-204ENST00000438393 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
BRD1-204ENST00000438393 PRDM2Q13029 1718 aa21.15■□□□□ 0.98
BRD1-204ENST00000438393 CUX1P39880 1505 aa21.13■□□□□ 0.97
BRD1-204ENST00000438393 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
BRD1-204ENST00000438393 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
BRD1-204ENST00000438393 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
BRD1-204ENST00000438393 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
BRD1-204ENST00000438393 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
BRD1-204ENST00000438393 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
BRD1-204ENST00000438393 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
BRD1-204ENST00000438393 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
BRD1-204ENST00000438393 SOGA1O94964 1423 aa20.96■□□□□ 0.95
BRD1-204ENST00000438393 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
BRD1-204ENST00000438393 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
BRD1-204ENST00000438393 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
BRD1-204ENST00000438393 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.94
BRD1-204ENST00000438393 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.93
BRD1-204ENST00000438393 WDR62O43379 1518 aa20.86■□□□□ 0.93
BRD1-204ENST00000438393 CUX2O14529 1486 aa20.84■□□□□ 0.93
BRD1-204ENST00000438393 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
BRD1-204ENST00000438393 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
BRD1-204ENST00000438393 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
BRD1-204ENST00000438393 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■■■ 30.2
BRD1-204ENST00000438393 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
BRD1-204ENST00000438393 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
BRD1-204ENST00000438393 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
BRD1-204ENST00000438393 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
BRD1-204ENST00000438393 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
BRD1-204ENST00000438393 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
BRD1-204ENST00000438393 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
BRD1-204ENST00000438393 FBLN2P98095 1184 aa20.67■□□□□ 0.9
BRD1-204ENST00000438393 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
BRD1-204ENST00000438393 ZEB1P37275 1124 aaPredicted RBP20.62■□□□□ 0.89
BRD1-204ENST00000438393 IGF1RP08069 1367 aa20.6■□□□□ 0.89
BRD1-204ENST00000438393 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
BRD1-204ENST00000438393 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
BRD1-204ENST00000438393 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
BRD1-204ENST00000438393 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
BRD1-204ENST00000438393 EEA1Q15075 1411 aa20.51■□□□□ 0.87
BRD1-204ENST00000438393 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
BRD1-204ENST00000438393 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
BRD1-204ENST00000438393 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
BRD1-204ENST00000438393 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
BRD1-204ENST00000438393 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
BRD1-204ENST00000438393 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
BRD1-204ENST00000438393 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
BRD1-204ENST00000438393 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
BRD1-204ENST00000438393 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
BRD1-204ENST00000438393 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
BRD1-204ENST00000438393 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms