Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
R3HCC1Q9Y3T6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 AC013268.4-201ENST00000637413 2228 ntBASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SCARNA2-201ENST00000458748 420 ntBASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 AC002558.1-201ENST00000488906 803 ntBASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 MTDHP3-201ENST00000594186 672 ntBASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 AC008608.2-201ENST00000606089 416 ntBASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HCC1Q9Y3T6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 EMBP1-201ENST00000458200 901 ntBASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
R3HCC1Q9Y3T6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3HCC1Q9Y3T6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms