RNA–Protein interactions for RNA: ENST00000337318.7

FAM53B-202, Transcript of family with sequence similarity 53 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53B, Length 5,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-202ENST00000337318 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
FAM53B-202ENST00000337318 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
FAM53B-202ENST00000337318 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
FAM53B-202ENST00000337318 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
FAM53B-202ENST00000337318 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
FAM53B-202ENST00000337318 APLP2Q06481 763 aa24.97■■□□□ 1.59
FAM53B-202ENST00000337318 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
FAM53B-202ENST00000337318 PELP1Q8IZL8 1130 aaKnown RBP24.1■■□□□ 1.45
FAM53B-202ENST00000337318 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
FAM53B-202ENST00000337318 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
FAM53B-202ENST00000337318 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
FAM53B-202ENST00000337318 UBTFP17480 764 aaKnown RBP23.9■■□□□ 1.42
FAM53B-202ENST00000337318 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
FAM53B-202ENST00000337318 MYT1LQ9UL68 1186 aa23.55■■□□□ 1.36
FAM53B-202ENST00000337318 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
FAM53B-202ENST00000337318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
FAM53B-202ENST00000337318 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
FAM53B-202ENST00000337318 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
FAM53B-202ENST00000337318 ABCC9O60706 1549 aa23.41■■□□□ 1.34
FAM53B-202ENST00000337318 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
FAM53B-202ENST00000337318 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
FAM53B-202ENST00000337318 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
FAM53B-202ENST00000337318 ITGAEP38570 1179 aa22.9■■□□□ 1.26
FAM53B-202ENST00000337318 NEFLP07196 543 aa22.88■■□□□ 1.25
FAM53B-202ENST00000337318 ERICH6Q7L0X2 663 aa22.83■■□□□ 1.25
FAM53B-202ENST00000337318 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
FAM53B-202ENST00000337318 FBLN2P98095 1184 aa22.76■■□□□ 1.23
FAM53B-202ENST00000337318 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
FAM53B-202ENST00000337318 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
FAM53B-202ENST00000337318 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
FAM53B-202ENST00000337318 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
FAM53B-202ENST00000337318 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
FAM53B-202ENST00000337318 MYT1Q01538 1121 aa22.48■■□□□ 1.19
FAM53B-202ENST00000337318 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
FAM53B-202ENST00000337318 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
FAM53B-202ENST00000337318 YTHDC1Q96MU7 727 aaKnown RBP22.37■■□□□ 1.17
FAM53B-202ENST00000337318 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
FAM53B-202ENST00000337318 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
FAM53B-202ENST00000337318 ESF1Q9H501 851 aaKnown RBP22.32■■□□□ 1.16
FAM53B-202ENST00000337318 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
FAM53B-202ENST00000337318 DAXXQ9UER7 740 aaPredicted RBP22.26■■□□□ 1.15
FAM53B-202ENST00000337318 BCANQ96GW7 911 aa22.25■■□□□ 1.15
FAM53B-202ENST00000337318 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
FAM53B-202ENST00000337318 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
FAM53B-202ENST00000337318 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
FAM53B-202ENST00000337318 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
FAM53B-202ENST00000337318 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
FAM53B-202ENST00000337318 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
FAM53B-202ENST00000337318 ARID3CA6NKF2 412 aa22.03■■□□□ 1.12
FAM53B-202ENST00000337318 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
FAM53B-202ENST00000337318 NEFMP07197 916 aa22.02■■□□□ 1.12
FAM53B-202ENST00000337318 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
FAM53B-202ENST00000337318 HRCP23327 699 aa21.97■■□□□ 1.11
FAM53B-202ENST00000337318 STAG3Q9UJ98 1225 aa21.97■■□□□ 1.11
FAM53B-202ENST00000337318 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
FAM53B-202ENST00000337318 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
FAM53B-202ENST00000337318 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
FAM53B-202ENST00000337318 ZBTB47Q9UFB7 747 aaPredicted RBP21.9■■□□□ 1.1
FAM53B-202ENST00000337318 SLC24A1O60721 1099 aa21.83■■□□□ 1.08
FAM53B-202ENST00000337318 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
FAM53B-202ENST00000337318 ANP32CO43423 234 aa21.76■■□□□ 1.07
FAM53B-202ENST00000337318 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
FAM53B-202ENST00000337318 NACADO15069 1562 aa21.7■■□□□ 1.06
FAM53B-202ENST00000337318 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
FAM53B-202ENST00000337318 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
FAM53B-202ENST00000337318 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
FAM53B-202ENST00000337318 DIEXFQ68CQ4 756 aaKnown RBP21.63■■□□□ 1.05
FAM53B-202ENST00000337318 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
FAM53B-202ENST00000337318 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
FAM53B-202ENST00000337318 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.03
FAM53B-202ENST00000337318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.03
FAM53B-202ENST00000337318 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
FAM53B-202ENST00000337318 PLEKHD1A6NEE1 506 aa21.49■■□□□ 1.03
FAM53B-202ENST00000337318 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
FAM53B-202ENST00000337318 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
FAM53B-202ENST00000337318 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
FAM53B-202ENST00000337318 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
FAM53B-202ENST00000337318 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
FAM53B-202ENST00000337318 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
FAM53B-202ENST00000337318 RTL5Q5HYW3 569 aaPredicted RBP21.36■■□□□ 1.01
FAM53B-202ENST00000337318 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
FAM53B-202ENST00000337318 EEA1Q15075 1411 aa21.34■■□□□ 1.01
FAM53B-202ENST00000337318 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
FAM53B-202ENST00000337318 C14orf37Q86TY3 774 aa21.3■■□□□ 1
FAM53B-202ENST00000337318 KIF27Q86VH2 1401 aa21.27■■□□□ 1
FAM53B-202ENST00000337318 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
FAM53B-202ENST00000337318 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
FAM53B-202ENST00000337318 CLIP1P30622 1438 aa21.23■□□□□ 0.99
FAM53B-202ENST00000337318 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.999e-6■■■■■ 50.1
FAM53B-202ENST00000337318 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
FAM53B-202ENST00000337318 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
FAM53B-202ENST00000337318 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
FAM53B-202ENST00000337318 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
FAM53B-202ENST00000337318 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.98
FAM53B-202ENST00000337318 GOLGA3Q08378 1498 aa21.14■□□□□ 0.97
FAM53B-202ENST00000337318 A0A0G2JS52 829 aa21.12■□□□□ 0.97
FAM53B-202ENST00000337318 WDR43Q15061 677 aaKnown RBP eCLIP21.1■□□□□ 0.97
FAM53B-202ENST00000337318 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
FAM53B-202ENST00000337318 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
FAM53B-202ENST00000337318 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms