RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
PDZD4-201ENST00000164640 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
PDZD4-201ENST00000164640 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
PDZD4-201ENST00000164640 HRCP23327 699 aa25.16■■□□□ 1.62
PDZD4-201ENST00000164640 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
PDZD4-201ENST00000164640 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
PDZD4-201ENST00000164640 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
PDZD4-201ENST00000164640 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
PDZD4-201ENST00000164640 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
PDZD4-201ENST00000164640 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
PDZD4-201ENST00000164640 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.46
PDZD4-201ENST00000164640 TRIM26Q12899 539 aaPredicted RBP23.94■■□□□ 1.42
PDZD4-201ENST00000164640 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
PDZD4-201ENST00000164640 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
PDZD4-201ENST00000164640 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
PDZD4-201ENST00000164640 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
PDZD4-201ENST00000164640 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
PDZD4-201ENST00000164640 MYT1Q01538 1121 aa23.43■■□□□ 1.34
PDZD4-201ENST00000164640 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
PDZD4-201ENST00000164640 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
PDZD4-201ENST00000164640 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
PDZD4-201ENST00000164640 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
PDZD4-201ENST00000164640 CCER1Q8TC90 406 aaPredicted RBP23.32■■□□□ 1.32
PDZD4-201ENST00000164640 TTBK1Q5TCY1 1321 aaPredicted RBP23.25■■□□□ 1.31
PDZD4-201ENST00000164640 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
PDZD4-201ENST00000164640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
PDZD4-201ENST00000164640 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
PDZD4-201ENST00000164640 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.3
PDZD4-201ENST00000164640 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
PDZD4-201ENST00000164640 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
PDZD4-201ENST00000164640 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
PDZD4-201ENST00000164640 MIER1Q8N108 512 aa22.45■■□□□ 1.18
PDZD4-201ENST00000164640 HNRNPUL2Q1KMD3 747 aaKnown RBP22.37■■□□□ 1.17
PDZD4-201ENST00000164640 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
PDZD4-201ENST00000164640 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
PDZD4-201ENST00000164640 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
PDZD4-201ENST00000164640 BCANQ96GW7 911 aa22.15■■□□□ 1.14
PDZD4-201ENST00000164640 BCL11AQ9H165 835 aa22.07■■□□□ 1.12
PDZD4-201ENST00000164640 APLP2Q06481 763 aa22.06■■□□□ 1.12
PDZD4-201ENST00000164640 ANP32EQ9BTT0 268 aa22.03■■□□□ 1.12
PDZD4-201ENST00000164640 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
PDZD4-201ENST00000164640 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
PDZD4-201ENST00000164640 TSHZ2Q9NRE2 1034 aa21.9■■□□□ 1.1
PDZD4-201ENST00000164640 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
PDZD4-201ENST00000164640 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
PDZD4-201ENST00000164640 ABCC9O60706 1549 aa21.86■■□□□ 1.09
PDZD4-201ENST00000164640 CEP162Q5TB80 1403 aa21.81■■□□□ 1.08
PDZD4-201ENST00000164640 NEFLP07196 543 aa21.79■■□□□ 1.08
PDZD4-201ENST00000164640 ERICH6Q7L0X2 663 aa21.78■■□□□ 1.08
PDZD4-201ENST00000164640 FKBP8Q14318 412 aa21.76■■□□□ 1.07
PDZD4-201ENST00000164640 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
PDZD4-201ENST00000164640 ITGAEP38570 1179 aa21.7■■□□□ 1.06
PDZD4-201ENST00000164640 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
PDZD4-201ENST00000164640 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
PDZD4-201ENST00000164640 SOGA1O94964 1423 aa21.54■■□□□ 1.04
PDZD4-201ENST00000164640 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
PDZD4-201ENST00000164640 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
PDZD4-201ENST00000164640 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
PDZD4-201ENST00000164640 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
PDZD4-201ENST00000164640 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
PDZD4-201ENST00000164640 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
PDZD4-201ENST00000164640 ABCC8Q09428 1581 aa21.45■■□□□ 1.03
PDZD4-201ENST00000164640 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
PDZD4-201ENST00000164640 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
PDZD4-201ENST00000164640 IRX6P78412 446 aaPredicted RBP21.35■■□□□ 1.01
PDZD4-201ENST00000164640 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
PDZD4-201ENST00000164640 WIZO95785 1651 aa21.32■■□□□ 1
PDZD4-201ENST00000164640 CLIP1P30622 1438 aa21.32■■□□□ 1
PDZD4-201ENST00000164640 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
PDZD4-201ENST00000164640 GOLGA3Q08378 1498 aa21.28■■□□□ 1
PDZD4-201ENST00000164640 ANP32CO43423 234 aa21.23■□□□□ 0.99
PDZD4-201ENST00000164640 DHX57Q6P158 1386 aaKnown RBP21.19■□□□□ 0.98
PDZD4-201ENST00000164640 NBR1Q14596 966 aa21.16■□□□□ 0.98
PDZD4-201ENST00000164640 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
PDZD4-201ENST00000164640 EEA1Q15075 1411 aa21.13■□□□□ 0.97
PDZD4-201ENST00000164640 MSH5O43196 834 aa21.12■□□□□ 0.97
PDZD4-201ENST00000164640 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
PDZD4-201ENST00000164640 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
PDZD4-201ENST00000164640 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
PDZD4-201ENST00000164640 SIN3AQ96ST3 1273 aa21.08■□□□□ 0.96
PDZD4-201ENST00000164640 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
PDZD4-201ENST00000164640 DEKP35659 375 aaKnown RBP21.06■□□□□ 0.96
PDZD4-201ENST00000164640 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
PDZD4-201ENST00000164640 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.95
PDZD4-201ENST00000164640 PRKCSHP14314 528 aaPredicted RBP20.99■□□□□ 0.95
PDZD4-201ENST00000164640 RTL5Q5HYW3 569 aaPredicted RBP20.95■□□□□ 0.94
PDZD4-201ENST00000164640 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
PDZD4-201ENST00000164640 B4GALNT3Q6L9W6 998 aa20.88■□□□□ 0.93
PDZD4-201ENST00000164640 RTN4Q9NQC3 1192 aaKnown RBP20.87■□□□□ 0.93
PDZD4-201ENST00000164640 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
PDZD4-201ENST00000164640 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
PDZD4-201ENST00000164640 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
PDZD4-201ENST00000164640 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
PDZD4-201ENST00000164640 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.92
PDZD4-201ENST00000164640 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
PDZD4-201ENST00000164640 RAB3GAP2Q9H2M9 1393 aa20.82■□□□□ 0.92
PDZD4-201ENST00000164640 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
PDZD4-201ENST00000164640 ANO8Q9HCE9 1232 aaPredicted RBP20.8■□□□□ 0.92
PDZD4-201ENST00000164640 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
PDZD4-201ENST00000164640 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms