RNA–Protein interactions for RNA: ENST00000299338.10

FAM227B-201, Transcript of family with sequence similarity 227 member B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FAM227B, Length 2,008 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-201ENST00000299338 NISCHQ9Y2I1 1504 aa37.06■■■■□ 3.52
FAM227B-201ENST00000299338 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
FAM227B-201ENST00000299338 ABCC9O60706 1549 aa31.14■■■□□ 2.58
FAM227B-201ENST00000299338 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
FAM227B-201ENST00000299338 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
FAM227B-201ENST00000299338 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
FAM227B-201ENST00000299338 SHROOM4Q9ULL8 1493 aa30.29■■■□□ 2.44
FAM227B-201ENST00000299338 NACADO15069 1562 aa30.25■■■□□ 2.43
FAM227B-201ENST00000299338 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
FAM227B-201ENST00000299338 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
FAM227B-201ENST00000299338 SCRIBQ14160 1630 aa29.9■■■□□ 2.38
FAM227B-201ENST00000299338 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
FAM227B-201ENST00000299338 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
FAM227B-201ENST00000299338 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
FAM227B-201ENST00000299338 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
FAM227B-201ENST00000299338 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
FAM227B-201ENST00000299338 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
FAM227B-201ENST00000299338 MROH2BQ7Z745 1585 aa28.68■■■□□ 2.18
FAM227B-201ENST00000299338 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
FAM227B-201ENST00000299338 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
FAM227B-201ENST00000299338 WIZO95785 1651 aa28.43■■■□□ 2.14
FAM227B-201ENST00000299338 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.13
FAM227B-201ENST00000299338 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
FAM227B-201ENST00000299338 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
FAM227B-201ENST00000299338 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
FAM227B-201ENST00000299338 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
FAM227B-201ENST00000299338 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
FAM227B-201ENST00000299338 BAZ1BQ9UIG0 1483 aaKnown RBP28.04■■■□□ 2.08
FAM227B-201ENST00000299338 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
FAM227B-201ENST00000299338 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
FAM227B-201ENST00000299338 CCDC88BA6NC98 1476 aa27.84■■■□□ 2.05
FAM227B-201ENST00000299338 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
FAM227B-201ENST00000299338 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
FAM227B-201ENST00000299338 CADPSQ9ULU8 1353 aa27.29■■□□□ 1.96
FAM227B-201ENST00000299338 CFTRP13569 1480 aa27.28■■□□□ 1.96
FAM227B-201ENST00000299338 NESP48681 1621 aa27.23■■□□□ 1.95
FAM227B-201ENST00000299338 TRIM41Q8WV44 630 aa27.21■■□□□ 1.95
FAM227B-201ENST00000299338 ABCC8Q09428 1581 aa27.2■■□□□ 1.95
FAM227B-201ENST00000299338 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
FAM227B-201ENST00000299338 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
FAM227B-201ENST00000299338 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
FAM227B-201ENST00000299338 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
FAM227B-201ENST00000299338 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
FAM227B-201ENST00000299338 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
FAM227B-201ENST00000299338 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
FAM227B-201ENST00000299338 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
FAM227B-201ENST00000299338 CUX1P39880 1505 aa26.82■■□□□ 1.88
FAM227B-201ENST00000299338 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
FAM227B-201ENST00000299338 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
FAM227B-201ENST00000299338 ERCC6Q03468 1493 aa26.71■■□□□ 1.87
FAM227B-201ENST00000299338 BIVM-ERCC5R4GMW8 1640 aa26.69■■□□□ 1.86
FAM227B-201ENST00000299338 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
FAM227B-201ENST00000299338 SOGA1O94964 1423 aa26.65■■□□□ 1.86
FAM227B-201ENST00000299338 TOPBP1Q92547 1522 aa26.64■■□□□ 1.86
FAM227B-201ENST00000299338 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
FAM227B-201ENST00000299338 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
FAM227B-201ENST00000299338 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
FAM227B-201ENST00000299338 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
FAM227B-201ENST00000299338 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
FAM227B-201ENST00000299338 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
FAM227B-201ENST00000299338 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.83
FAM227B-201ENST00000299338 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
FAM227B-201ENST00000299338 CSRNP3Q8WYN3 585 aa26.41■■□□□ 1.82
FAM227B-201ENST00000299338 CUX2O14529 1486 aa26.4■■□□□ 1.82
FAM227B-201ENST00000299338 WDR62O43379 1518 aa26.39■■□□□ 1.82
FAM227B-201ENST00000299338 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.81
FAM227B-201ENST00000299338 EEA1Q15075 1411 aa26.36■■□□□ 1.81
FAM227B-201ENST00000299338 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
FAM227B-201ENST00000299338 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
FAM227B-201ENST00000299338 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
FAM227B-201ENST00000299338 TARBP1Q13395 1621 aaKnown RBP26.22■■□□□ 1.79
FAM227B-201ENST00000299338 IFT140Q96RY7 1462 aa26.18■■□□□ 1.78
FAM227B-201ENST00000299338 IGF1RP08069 1367 aa26.18■■□□□ 1.78
FAM227B-201ENST00000299338 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
FAM227B-201ENST00000299338 AQRO60306 1485 aaKnown RBP eCLIP26.16■■□□□ 1.78
FAM227B-201ENST00000299338 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
FAM227B-201ENST00000299338 UBTFP17480 764 aaKnown RBP26.14■■□□□ 1.78
FAM227B-201ENST00000299338 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
FAM227B-201ENST00000299338 RAPGEF2Q9Y4G8 1499 aa26.09■■□□□ 1.77
FAM227B-201ENST00000299338 ABCA5Q8WWZ7 1642 aa26.07■■□□□ 1.76
FAM227B-201ENST00000299338 GOLGA3Q08378 1498 aa26.06■■□□□ 1.76
FAM227B-201ENST00000299338 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
FAM227B-201ENST00000299338 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
FAM227B-201ENST00000299338 KIF21BO75037 1637 aa26.03■■□□□ 1.76
FAM227B-201ENST00000299338 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
FAM227B-201ENST00000299338 RANGAP1P46060 587 aaPredicted RBP25.97■■□□□ 1.75
FAM227B-201ENST00000299338 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
FAM227B-201ENST00000299338 GRIN2BQ13224 1484 aa25.94■■□□□ 1.74
FAM227B-201ENST00000299338 TNIKQ9UKE5 1360 aa25.92■■□□□ 1.74
FAM227B-201ENST00000299338 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
FAM227B-201ENST00000299338 CUL7Q14999 1698 aa25.88■■□□□ 1.73
FAM227B-201ENST00000299338 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
FAM227B-201ENST00000299338 FBLN2P98095 1184 aa25.83■■□□□ 1.73
FAM227B-201ENST00000299338 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
FAM227B-201ENST00000299338 CEP162Q5TB80 1403 aa25.81■■□□□ 1.72
FAM227B-201ENST00000299338 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
FAM227B-201ENST00000299338 CHMP7Q8WUX9 453 aaPredicted RBP25.76■■□□□ 1.71
FAM227B-201ENST00000299338 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
FAM227B-201ENST00000299338 HRCP23327 699 aa25.71■■□□□ 1.71
FAM227B-201ENST00000299338 CLIP1P30622 1438 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms