RNA–Protein interactions for RNA: ENST00000612661.1

MARCKS-201, Transcript of myristoylated alanine rich protein kinase C substrate, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARCKS, Length 4,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCKS-201ENST00000612661 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
MARCKS-201ENST00000612661 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
MARCKS-201ENST00000612661 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
MARCKS-201ENST00000612661 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
MARCKS-201ENST00000612661 ABCC9O60706 1549 aa26.37■■□□□ 1.81
MARCKS-201ENST00000612661 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
MARCKS-201ENST00000612661 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
MARCKS-201ENST00000612661 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
MARCKS-201ENST00000612661 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
MARCKS-201ENST00000612661 RANGAP1P46060 587 aaPredicted RBP25.17■■□□□ 1.62
MARCKS-201ENST00000612661 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
MARCKS-201ENST00000612661 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
MARCKS-201ENST00000612661 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
MARCKS-201ENST00000612661 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
MARCKS-201ENST00000612661 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
MARCKS-201ENST00000612661 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
MARCKS-201ENST00000612661 APLP2Q06481 763 aa24.74■■□□□ 1.55
MARCKS-201ENST00000612661 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
MARCKS-201ENST00000612661 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
MARCKS-201ENST00000612661 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
MARCKS-201ENST00000612661 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
MARCKS-201ENST00000612661 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
MARCKS-201ENST00000612661 HRCP23327 699 aa24.32■■□□□ 1.48
MARCKS-201ENST00000612661 NACADO15069 1562 aa24.31■■□□□ 1.48
MARCKS-201ENST00000612661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
MARCKS-201ENST00000612661 FBLN2P98095 1184 aa24.06■■□□□ 1.44
MARCKS-201ENST00000612661 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
MARCKS-201ENST00000612661 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
MARCKS-201ENST00000612661 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
MARCKS-201ENST00000612661 DCAF1Q9Y4B6 1507 aa23.91■■□□□ 1.42
MARCKS-201ENST00000612661 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
MARCKS-201ENST00000612661 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
MARCKS-201ENST00000612661 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
MARCKS-201ENST00000612661 ITGAEP38570 1179 aa23.79■■□□□ 1.4
MARCKS-201ENST00000612661 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
MARCKS-201ENST00000612661 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
MARCKS-201ENST00000612661 MYT1LQ9UL68 1186 aa23.65■■□□□ 1.38
MARCKS-201ENST00000612661 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
MARCKS-201ENST00000612661 CSRNP3Q8WYN3 585 aa23.63■■□□□ 1.37
MARCKS-201ENST00000612661 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
MARCKS-201ENST00000612661 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
MARCKS-201ENST00000612661 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
MARCKS-201ENST00000612661 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
MARCKS-201ENST00000612661 MROH2BQ7Z745 1585 aa23.49■■□□□ 1.35
MARCKS-201ENST00000612661 CENPBP07199 599 aaPredicted RBP23.35■■□□□ 1.33
MARCKS-201ENST00000612661 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
MARCKS-201ENST00000612661 ERCC6Q03468 1493 aa23.25■■□□□ 1.31
MARCKS-201ENST00000612661 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
MARCKS-201ENST00000612661 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
MARCKS-201ENST00000612661 WIZO95785 1651 aa23.13■■□□□ 1.29
MARCKS-201ENST00000612661 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
MARCKS-201ENST00000612661 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
MARCKS-201ENST00000612661 GTF3C3Q9Y5Q9 886 aa23.1■■□□□ 1.29
MARCKS-201ENST00000612661 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
MARCKS-201ENST00000612661 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
MARCKS-201ENST00000612661 MYT1Q01538 1121 aa23.05■■□□□ 1.28
MARCKS-201ENST00000612661 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
MARCKS-201ENST00000612661 TRIM52Q96A61 297 aa22.94■■□□□ 1.26
MARCKS-201ENST00000612661 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
MARCKS-201ENST00000612661 NPM1P06748 294 aaKnown RBP eCLIP22.89■■□□□ 1.25
MARCKS-201ENST00000612661 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
MARCKS-201ENST00000612661 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
MARCKS-201ENST00000612661 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
MARCKS-201ENST00000612661 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
MARCKS-201ENST00000612661 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
MARCKS-201ENST00000612661 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
MARCKS-201ENST00000612661 POLR3GLQ9BT43 218 aa22.84■■□□□ 1.25
MARCKS-201ENST00000612661 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
MARCKS-201ENST00000612661 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.24
MARCKS-201ENST00000612661 SOGA1O94964 1423 aa22.81■■□□□ 1.24
MARCKS-201ENST00000612661 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
MARCKS-201ENST00000612661 CUX2O14529 1486 aa22.8■■□□□ 1.24
MARCKS-201ENST00000612661 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
MARCKS-201ENST00000612661 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
MARCKS-201ENST00000612661 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
MARCKS-201ENST00000612661 ACIN1Q9UKV3 1341 aaKnown RBP22.75■■□□□ 1.23
MARCKS-201ENST00000612661 KCNH8Q96L42 1107 aa22.73■■□□□ 1.23
MARCKS-201ENST00000612661 CLIP1P30622 1438 aa22.73■■□□□ 1.23
MARCKS-201ENST00000612661 EEA1Q15075 1411 aa22.65■■□□□ 1.22
MARCKS-201ENST00000612661 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
MARCKS-201ENST00000612661 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.22
MARCKS-201ENST00000612661 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
MARCKS-201ENST00000612661 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
MARCKS-201ENST00000612661 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
MARCKS-201ENST00000612661 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
MARCKS-201ENST00000612661 MTUS2Q5JR59 1369 aa22.59■■□□□ 1.21
MARCKS-201ENST00000612661 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
MARCKS-201ENST00000612661 CEP162Q5TB80 1403 aa22.58■■□□□ 1.2
MARCKS-201ENST00000612661 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
MARCKS-201ENST00000612661 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
MARCKS-201ENST00000612661 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
MARCKS-201ENST00000612661 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
MARCKS-201ENST00000612661 NESP48681 1621 aa22.49■■□□□ 1.19
MARCKS-201ENST00000612661 ZNF316A6NFI3 1004 aaPredicted RBP22.47■■□□□ 1.19
MARCKS-201ENST00000612661 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
MARCKS-201ENST00000612661 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
MARCKS-201ENST00000612661 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
MARCKS-201ENST00000612661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.43■■□□□ 1.18
MARCKS-201ENST00000612661 BCANQ96GW7 911 aa22.42■■□□□ 1.18
MARCKS-201ENST00000612661 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms