Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.26■■■□□ 2.922e-8■□□□□ 11.2
XRN2Q9H0D6 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)18.22■□□□□ 0.512e-8■□□□□ 11.2
XRN2Q9H0D6 NT5DC2-212ENST00000487779 536 ntTSL 314.53□□□□□ -0.082e-8■□□□□ 11.2
XRN2Q9H0D6 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.292e-8■□□□□ 11.2
XRN2Q9H0D6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.22■□□□□ 0.992e-7■□□□□ 11.2
XRN2Q9H0D6 UBC-208ENST00000540700 627 ntTSL 219.59■□□□□ 0.732e-7■□□□□ 11.2
XRN2Q9H0D6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.642e-7■□□□□ 11.2
XRN2Q9H0D6 UBC-204ENST00000536661 624 ntTSL 217.85■□□□□ 0.452e-7■□□□□ 11.2
XRN2Q9H0D6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.86□□□□□ -0.032e-7■□□□□ 11.2
XRN2Q9H0D6 UBC-211ENST00000542416 517 ntTSL 411.1□□□□□ -0.632e-7■□□□□ 11.2
XRN2Q9H0D6 UBC-213ENST00000546120 718 ntTSL 5 BASIC9.58□□□□□ -0.882e-7■□□□□ 11.2
XRN2Q9H0D6 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.632e-8■□□□□ 11.2
XRN2Q9H0D6 RTL10-204ENST00000416337 730 ntAPPRIS ALT2 TSL 223.18■■□□□ 1.33e-7■□□□□ 11.2
XRN2Q9H0D6 UNC13D-212ENST00000589670 668 ntTSL 321.36■■□□□ 1.014e-9■□□□□ 11.2
XRN2Q9H0D6 ANKRD27-206ENST00000588700 773 ntTSL 520.34■□□□□ 0.853e-7■□□□□ 11.2
XRN2Q9H0D6 ANKRD27-202ENST00000586463 743 ntTSL 519.93■□□□□ 0.783e-7■□□□□ 11.2
XRN2Q9H0D6 UBAC1-202ENST00000465873 882 ntTSL 219.39■□□□□ 0.693e-10■□□□□ 11.2
XRN2Q9H0D6 ANKRD27-207ENST00000590519 1067 ntTSL 519.38■□□□□ 0.693e-7■□□□□ 11.2
XRN2Q9H0D6 ANKRD27-203ENST00000586693 557 ntTSL 316.67■□□□□ 0.263e-7■□□□□ 11.2
XRN2Q9H0D6 RTL10-205ENST00000484072 1385 ntTSL 215.77■□□□□ 0.123e-7■□□□□ 11.2
XRN2Q9H0D6 DHX9-202ENST00000473076 1378 ntTSL 1 (best)15.01□□□□□ -0.013e-7■□□□□ 11.2
XRN2Q9H0D6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.13e-7■□□□□ 11.2
XRN2Q9H0D6 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.373e-7■□□□□ 11.2
XRN2Q9H0D6 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC12.52□□□□□ -0.413e-7■□□□□ 11.2
XRN2Q9H0D6 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.413e-7■□□□□ 11.2
XRN2Q9H0D6 DHX9-207ENST00000485081 2531 ntTSL 211.23□□□□□ -0.613e-7■□□□□ 11.2
XRN2Q9H0D6 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.733e-7■□□□□ 11.2
XRN2Q9H0D6 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.033e-7■□□□□ 11.2
XRN2Q9H0D6 DHX9-203ENST00000474446 848 ntTSL 38.54□□□□□ -1.043e-7■□□□□ 11.2
XRN2Q9H0D6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.114e-7■□□□□ 11.1
XRN2Q9H0D6 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.44e-7■□□□□ 11.1
XRN2Q9H0D6 FAM20A-203ENST00000590074 1642 ntTSL 224■■□□□ 1.431e-17■□□□□ 11.1
XRN2Q9H0D6 FAM20A-202ENST00000375556 2081 ntTSL 218.37■□□□□ 0.531e-17■□□□□ 11.1
XRN2Q9H0D6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.291e-17■□□□□ 11.1
XRN2Q9H0D6 FAM20A-204ENST00000590873 804 ntTSL 311.23□□□□□ -0.611e-17■□□□□ 11.1
XRN2Q9H0D6 FAM20A-206ENST00000592847 824 ntTSL 39.96□□□□□ -0.821e-17■□□□□ 11.1
XRN2Q9H0D6 FAM20A-201ENST00000226094 3668 ntTSL 1 (best)7.22□□□□□ -1.251e-17■□□□□ 11.1
XRN2Q9H0D6 SH2B1-209ENST00000563674 719 ntTSL 327.43■■□□□ 1.989e-10■□□□□ 11.1
XRN2Q9H0D6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.68■■□□□ 1.869e-10■□□□□ 11.1
XRN2Q9H0D6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.599e-10■□□□□ 11.1
XRN2Q9H0D6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.45■□□□□ 0.549e-10■□□□□ 11.1
XRN2Q9H0D6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.44■□□□□ 0.389e-10■□□□□ 11.1
XRN2Q9H0D6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.25■□□□□ 0.199e-10■□□□□ 11.1
XRN2Q9H0D6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.47■□□□□ 0.079e-10■□□□□ 11.1
XRN2Q9H0D6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.126e-6■□□□□ 11.1
XRN2Q9H0D6 MAP2K3-208ENST00000496046 2089 ntTSL 513.16□□□□□ -0.36e-6■□□□□ 11.1
XRN2Q9H0D6 MAP2K3-204ENST00000395491 2401 ntTSL 212.73□□□□□ -0.376e-6■□□□□ 11.1
XRN2Q9H0D6 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.543e-6■□□□□ 11.1
XRN2Q9H0D6 CHST15-203ENST00000462406 826 ntTSL 210.14□□□□□ -0.793e-6■□□□□ 11.1
XRN2Q9H0D6 RPS27A-205ENST00000463185 590 ntTSL 1 (best)24.97■■□□□ 1.599e-6■□□□□ 11.1
XRN2Q9H0D6 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC12.38□□□□□ -0.433e-6■□□□□ 11.1
XRN2Q9H0D6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.313e-6■□□□□ 11.1
XRN2Q9H0D6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.18■□□□□ 0.984e-6■□□□□ 11.1
XRN2Q9H0D6 TM9SF4-204ENST00000442842 563 ntTSL 415.36■□□□□ 0.051e-6■□□□□ 11.1
XRN2Q9H0D6 TM9SF4-203ENST00000417389 553 ntTSL 412.93□□□□□ -0.341e-6■□□□□ 11.1
XRN2Q9H0D6 TM9SF4-205ENST00000450829 550 ntTSL 46.33□□□□□ -1.41e-6■□□□□ 11.1
XRN2Q9H0D6 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.282e-6■□□□□ 11.1
XRN2Q9H0D6 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.282e-6■□□□□ 11.1
XRN2Q9H0D6 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)7.06□□□□□ -1.282e-6■□□□□ 11.1
XRN2Q9H0D6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.475e-7■□□□□ 11.1
XRN2Q9H0D6 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.635e-7■□□□□ 11.1
XRN2Q9H0D6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.49■□□□□ 0.718e-7■□□□□ 11.1
XRN2Q9H0D6 SLC16A3-220ENST00000584781 562 ntTSL 427.3■■□□□ 1.966e-7■□□□□ 11.1
XRN2Q9H0D6 SLC16A3-208ENST00000579572 863 ntTSL 323.96■■□□□ 1.436e-7■□□□□ 11.1
XRN2Q9H0D6 SLC16A3-219ENST00000584689 1033 ntTSL 222.51■■□□□ 1.196e-7■□□□□ 11.1
XRN2Q9H0D6 SLC16A3-206ENST00000578684 866 ntTSL 322.25■■□□□ 1.156e-7■□□□□ 11.1
XRN2Q9H0D6 SLC16A3-203ENST00000577650 545 ntTSL 321.43■■□□□ 1.026e-7■□□□□ 11.1
XRN2Q9H0D6 SLC16A3-217ENST00000583237 808 ntTSL 321.31■■□□□ 16e-7■□□□□ 11.1
XRN2Q9H0D6 ZNF3-212ENST00000466121 522 ntTSL 216.04■□□□□ 0.166e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-209ENST00000441298 574 ntTSL 415.2■□□□□ 0.026e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-204ENST00000412947 595 ntTSL 1 (best)14.49□□□□□ -0.096e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-210ENST00000449785 735 ntTSL 314.49□□□□□ -0.096e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-211ENST00000460331 562 ntTSL 413.95□□□□□ -0.186e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-213ENST00000479192 640 ntTSL 213.44□□□□□ -0.266e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-214ENST00000485892 722 ntTSL 213.39□□□□□ -0.276e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-201ENST00000292393 512 ntTSL 213.33□□□□□ -0.286e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-208ENST00000428683 999 ntTSL 212.42□□□□□ -0.426e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC11.69□□□□□ -0.546e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-215ENST00000487620 2660 ntTSL 29.5□□□□□ -0.896e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.046e-9■□□□□ 11
XRN2Q9H0D6 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.096e-9■□□□□ 11
XRN2Q9H0D6 RNF126-204ENST00000590885 1436 ntTSL 521.38■■□□□ 1.012e-6■□□□□ 11
XRN2Q9H0D6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.1■□□□□ 0.972e-6■□□□□ 11
XRN2Q9H0D6 MICALL2-206ENST00000470807 668 ntTSL 319.99■□□□□ 0.795e-14■□□□□ 11
XRN2Q9H0D6 MICALL2-214ENST00000493998 404 ntTSL 215.39■□□□□ 0.055e-14■□□□□ 11
XRN2Q9H0D6 TMC6-209ENST00000588087 2384 ntTSL 221.38■■□□□ 1.012e-9■□□□□ 11
XRN2Q9H0D6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.87■□□□□ 0.932e-9■□□□□ 11
XRN2Q9H0D6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.83■□□□□ 0.444e-9■□□□□ 11
XRN2Q9H0D6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.49■□□□□ 0.394e-9■□□□□ 11
XRN2Q9H0D6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.314e-9■□□□□ 11
XRN2Q9H0D6 RBCK1-209ENST00000415942 2613 ntTSL 516.53■□□□□ 0.244e-9■□□□□ 11
XRN2Q9H0D6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.09■□□□□ 0.174e-9■□□□□ 11
XRN2Q9H0D6 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)15.53■□□□□ 0.084e-9■□□□□ 11
XRN2Q9H0D6 SLC16A3-205ENST00000578574 958 ntTSL 228.56■■■□□ 2.164e-7■□□□□ 11
XRN2Q9H0D6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.19■■□□□ 1.143e-6■□□□□ 11
XRN2Q9H0D6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.973e-6■□□□□ 11
XRN2Q9H0D6 HSF1-202ENST00000527328 2336 ntTSL 216.14■□□□□ 0.184e-6■□□□□ 11
XRN2Q9H0D6 HSF1-212ENST00000533240 561 ntTSL 515.76■□□□□ 0.114e-6■□□□□ 11
XRN2Q9H0D6 HSF1-210ENST00000532338 3451 ntTSL 212.93□□□□□ -0.344e-6■□□□□ 11
XRN2Q9H0D6 ASPSCR1-216ENST00000583503 641 ntTSL 321.65■■□□□ 1.066e-9■□□□□ 11
Retrieved 100 of 21,068 protein–RNA pairs in 99.2 ms