RNA–Protein interactions for RNA: ENST00000463185.1

RPS27A-205, Transcript of ribosomal protein S27a, humanhuman

TSL 1 (best)

Gene RPS27A, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-205ENST00000463185 NISCHQ9Y2I1 1504 aa51.54■■■■■ 5.84
RPS27A-205ENST00000463185 CCDC180Q9P1Z9 1646 aa46.22■■■■■ 4.99
RPS27A-205ENST00000463185 ABCC9O60706 1549 aa45.78■■■■■ 4.92
RPS27A-205ENST00000463185 RB1CC1Q8TDY2 1594 aa43.82■■■■■ 4.61
RPS27A-205ENST00000463185 NACADO15069 1562 aa43.58■■■■■ 4.57
RPS27A-205ENST00000463185 DCAF8L2P0C7V8 631 aa43.27■■■■■ 4.52
RPS27A-205ENST00000463185 MYO15BQ96JP2 1530 aa43.12■■■■■ 4.49
RPS27A-205ENST00000463185 UNC13AQ9UPW8 1703 aa42.81■■■■■ 4.44
RPS27A-205ENST00000463185 ZCCHC6Q5VYS8 1495 aaKnown RBP42.81■■■■■ 4.44
RPS27A-205ENST00000463185 DCAF1Q9Y4B6 1507 aa42.66■■■■■ 4.42
RPS27A-205ENST00000463185 PABPN1Q86U42 306 aaKnown RBP eCLIP42.61■■■■■ 4.41
RPS27A-205ENST00000463185 DNAJC5BQ9UF47 199 aa42.57■■■■■ 4.41
RPS27A-205ENST00000463185 BICRAQ9NZM4 1560 aa42.46■■■■■ 4.39
RPS27A-205ENST00000463185 SHROOM4Q9ULL8 1493 aa42.05■■■■■ 4.32
RPS27A-205ENST00000463185 SCRIBQ14160 1630 aa42.04■■■■■ 4.32
RPS27A-205ENST00000463185 CC2D2AQ9P2K1 1620 aa41.43■■■■■ 4.22
RPS27A-205ENST00000463185 EIF4G1Q04637 1599 aaKnown RBP41.42■■■■■ 4.22
RPS27A-205ENST00000463185 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
RPS27A-205ENST00000463185 NCAPD3P42695 1498 aa40.19■■■■■ 4.02
RPS27A-205ENST00000463185 SMARCA4P51532 1647 aa40.17■■■■■ 4.02
RPS27A-205ENST00000463185 ATAD2BQ9ULI0 1458 aa40.1■■■■■ 4.01
RPS27A-205ENST00000463185 SMARCA2P51531 1590 aa40.06■■■■■ 4
RPS27A-205ENST00000463185 BAZ1AQ9NRL2 1556 aaPredicted RBP40.04■■■■■ 4
RPS27A-205ENST00000463185 HMGXB3Q12766 1538 aa39.97■■■■□ 3.99
RPS27A-205ENST00000463185 PEG3Q9GZU2 1588 aa39.8■■■■□ 3.96
RPS27A-205ENST00000463185 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
RPS27A-205ENST00000463185 MROH2BQ7Z745 1585 aa39.68■■■■□ 3.94
RPS27A-205ENST00000463185 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
RPS27A-205ENST00000463185 CUX2O14529 1486 aa39.43■■■■□ 3.9
RPS27A-205ENST00000463185 NESP48681 1621 aa39.4■■■■□ 3.9
RPS27A-205ENST00000463185 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
RPS27A-205ENST00000463185 WIZO95785 1651 aa39.25■■■■□ 3.87
RPS27A-205ENST00000463185 PDS5BQ9NTI5 1447 aa39.03■■■■□ 3.84
RPS27A-205ENST00000463185 THOC2Q8NI27 1593 aaKnown RBP39.03■■■■□ 3.84
RPS27A-205ENST00000463185 KIF21AQ7Z4S6 1674 aa38.98■■■■□ 3.83
RPS27A-205ENST00000463185 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
RPS27A-205ENST00000463185 RSF1Q96T23 1441 aaPredicted RBP38.97■■■■□ 3.83
RPS27A-205ENST00000463185 DNAJC5Q9H3Z4 198 aa38.95■■■■□ 3.83
RPS27A-205ENST00000463185 TOP2AP11388 1531 aaKnown RBP38.82■■■■□ 3.8
RPS27A-205ENST00000463185 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
RPS27A-205ENST00000463185 CFTRP13569 1480 aa38.6■■■■□ 3.77
RPS27A-205ENST00000463185 CEP164Q9UPV0 1460 aa38.58■■■■□ 3.77
RPS27A-205ENST00000463185 WDR62O43379 1518 aa38.58■■■■□ 3.77
RPS27A-205ENST00000463185 FANCD2Q9BXW9 1451 aa38.54■■■■□ 3.76
RPS27A-205ENST00000463185 PRDM2Q13029 1718 aa38.35■■■■□ 3.73
RPS27A-205ENST00000463185 CCDC88BA6NC98 1476 aa38.31■■■■□ 3.72
RPS27A-205ENST00000463185 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
RPS27A-205ENST00000463185 TOPBP1Q92547 1522 aa37.85■■■■□ 3.65
RPS27A-205ENST00000463185 ABCC8Q09428 1581 aa37.85■■■■□ 3.65
RPS27A-205ENST00000463185 IFT140Q96RY7 1462 aa37.8■■■■□ 3.64
RPS27A-205ENST00000463185 DNMBPQ6XZF7 1577 aa37.77■■■■□ 3.64
RPS27A-205ENST00000463185 ZNF608Q9ULD9 1512 aaPredicted RBP37.63■■■■□ 3.61
RPS27A-205ENST00000463185 OSCARQ8IYS5 282 aa37.6■■■■□ 3.61
RPS27A-205ENST00000463185 EIF4G3O43432 1585 aaKnown RBP37.52■■■■□ 3.6
RPS27A-205ENST00000463185 TARBP1Q13395 1621 aaKnown RBP37.49■■■■□ 3.59
RPS27A-205ENST00000463185 POLA1P09884 1462 aaPredicted RBP37.47■■■■□ 3.59
RPS27A-205ENST00000463185 SUPT5HO00267 1087 aaKnown RBP37.41■■■■□ 3.58
RPS27A-205ENST00000463185 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
RPS27A-205ENST00000463185 AQRO60306 1485 aaKnown RBP eCLIP37.33■■■■□ 3.576e-10■■■■□ 23.6
RPS27A-205ENST00000463185 SOGA1O94964 1423 aa37.29■■■■□ 3.56
RPS27A-205ENST00000463185 FGD5Q6ZNL6 1462 aa37.28■■■■□ 3.56
RPS27A-205ENST00000463185 RAD54L2Q9Y4B4 1467 aa37.28■■■■□ 3.56
RPS27A-205ENST00000463185 CUX1P39880 1505 aa37.28■■■■□ 3.56
RPS27A-205ENST00000463185 WDR97A6NE52 1622 aa37.24■■■■□ 3.55
RPS27A-205ENST00000463185 CHD1O14646 1710 aa37.19■■■■□ 3.54
RPS27A-205ENST00000463185 TDRD9Q8NDG6 1382 aaKnown RBP37.14■■■■□ 3.54
RPS27A-205ENST00000463185 RIMBP3CA6NJZ7 1639 aa37.12■■■■□ 3.53
RPS27A-205ENST00000463185 RIMBP3BA6NNM3 1639 aa37.12■■■■□ 3.53
RPS27A-205ENST00000463185 RIMBP3Q9UFD9 1639 aa37.12■■■■□ 3.53
RPS27A-205ENST00000463185 ARHGEF11O15085 1522 aa37.03■■■■□ 3.52
RPS27A-205ENST00000463185 FBLN2P98095 1184 aa37.01■■■■□ 3.52
RPS27A-205ENST00000463185 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
RPS27A-205ENST00000463185 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
RPS27A-205ENST00000463185 MAGI1Q96QZ7 1491 aaPredicted RBP36.96■■■■□ 3.51
RPS27A-205ENST00000463185 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
RPS27A-205ENST00000463185 PBRM1Q86U86 1689 aa36.89■■■■□ 3.5
RPS27A-205ENST00000463185 GAPVD1Q14C86 1478 aa36.87■■■■□ 3.49
RPS27A-205ENST00000463185 ABCA5Q8WWZ7 1642 aa36.84■■■■□ 3.49
RPS27A-205ENST00000463185 BIVM-ERCC5R4GMW8 1640 aa36.84■■■■□ 3.49
RPS27A-205ENST00000463185 CHMP7Q8WUX9 453 aaPredicted RBP36.82■■■■□ 3.48
RPS27A-205ENST00000463185 SYNJ2O15056 1496 aa36.82■■■■□ 3.48
RPS27A-205ENST00000463185 TOP2BQ02880 1626 aa36.81■■■■□ 3.48
RPS27A-205ENST00000463185 SYNJ1O43426 1573 aa36.81■■■■□ 3.48
RPS27A-205ENST00000463185 WRNQ14191 1432 aaPredicted RBP eCLIP36.79■■■■□ 3.486e-18■□□□□ 8
RPS27A-205ENST00000463185 CLASP1Q7Z460 1538 aa36.76■■■■□ 3.48
RPS27A-205ENST00000463185 ARAP1Q96P48 1450 aa36.67■■■■□ 3.46
RPS27A-205ENST00000463185 CYB5RLQ6IPT4 315 aa36.66■■■■□ 3.46
RPS27A-205ENST00000463185 ADAMTS12P58397 1594 aa36.54■■■■□ 3.44
RPS27A-205ENST00000463185 GRIN2AQ12879 1464 aa36.49■■■■□ 3.43
RPS27A-205ENST00000463185 ERICH3Q5RHP9 1530 aa36.47■■■■□ 3.43
RPS27A-205ENST00000463185 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
RPS27A-205ENST00000463185 NUP160Q12769 1436 aa36.35■■■■□ 3.41
RPS27A-205ENST00000463185 CEP170Q5SW79 1584 aa36.33■■■■□ 3.41
RPS27A-205ENST00000463185 SHROOM2Q13796 1616 aa36.19■■■■□ 3.38
RPS27A-205ENST00000463185 TRHP20396 242 aaPredicted RBP36.17■■■■□ 3.38
RPS27A-205ENST00000463185 ERCC6L2Q5T890 1561 aa36.14■■■■□ 3.38
RPS27A-205ENST00000463185 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
RPS27A-205ENST00000463185 CUL7Q14999 1698 aa36.03■■■■□ 3.36
RPS27A-205ENST00000463185 RUSC2Q8N2Y8 1516 aa36.02■■■■□ 3.36
RPS27A-205ENST00000463185 IGF1RP08069 1367 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms