RNA–Protein interactions for RNA: ENST00000590074.5

FAM20A-203, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, humanhuman

TSL 2

Gene FAM20A, Length 1,642 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20A-203ENST00000590074 NISCHQ9Y2I1 1504 aa50.41■■■■■ 5.66
FAM20A-203ENST00000590074 CCDC180Q9P1Z9 1646 aa44.63■■■■■ 4.73
FAM20A-203ENST00000590074 ABCC9O60706 1549 aa43.13■■■■■ 4.5
FAM20A-203ENST00000590074 ZCCHC6Q5VYS8 1495 aaKnown RBP42.12■■■■■ 4.33
FAM20A-203ENST00000590074 DCAF8L2P0C7V8 631 aa41.81■■■■■ 4.28
FAM20A-203ENST00000590074 NACADO15069 1562 aa41.79■■■■■ 4.28
FAM20A-203ENST00000590074 DCAF1Q9Y4B6 1507 aa41.73■■■■■ 4.27
FAM20A-203ENST00000590074 MYO15BQ96JP2 1530 aa41.72■■■■■ 4.27
FAM20A-203ENST00000590074 RB1CC1Q8TDY2 1594 aa41.72■■■■■ 4.27
FAM20A-203ENST00000590074 UNC13AQ9UPW8 1703 aa40.91■■■■■ 4.14
FAM20A-203ENST00000590074 SCRIBQ14160 1630 aa40.77■■■■■ 4.12
FAM20A-203ENST00000590074 BICRAQ9NZM4 1560 aa40.5■■■■■ 4.07
FAM20A-203ENST00000590074 PABPN1Q86U42 306 aaKnown RBP eCLIP40.37■■■■■ 4.05
FAM20A-203ENST00000590074 SHROOM4Q9ULL8 1493 aa40.1■■■■■ 4.01
FAM20A-203ENST00000590074 EIF4G1Q04637 1599 aaKnown RBP39.36■■■■□ 3.89
FAM20A-203ENST00000590074 CECR2Q9BXF3 1484 aa39.23■■■■□ 3.87
FAM20A-203ENST00000590074 DNAJC5BQ9UF47 199 aa39.13■■■■□ 3.85
FAM20A-203ENST00000590074 CC2D2AQ9P2K1 1620 aa39.08■■■■□ 3.85
FAM20A-203ENST00000590074 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
FAM20A-203ENST00000590074 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
FAM20A-203ENST00000590074 MROH2BQ7Z745 1585 aa38.88■■■■□ 3.81
FAM20A-203ENST00000590074 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
FAM20A-203ENST00000590074 PEG3Q9GZU2 1588 aa38.66■■■■□ 3.78
FAM20A-203ENST00000590074 SMARCA2P51531 1590 aa38.64■■■■□ 3.78
FAM20A-203ENST00000590074 RSF1Q96T23 1441 aaPredicted RBP38.59■■■■□ 3.77
FAM20A-203ENST00000590074 NCAPD3P42695 1498 aa38.55■■■■□ 3.76
FAM20A-203ENST00000590074 WIZO95785 1651 aa38.52■■■■□ 3.76
FAM20A-203ENST00000590074 HMGXB3Q12766 1538 aa38.44■■■■□ 3.74
FAM20A-203ENST00000590074 BAZ1BQ9UIG0 1483 aaKnown RBP38.36■■■■□ 3.73
FAM20A-203ENST00000590074 TOP2AP11388 1531 aaKnown RBP38.1■■■■□ 3.69
FAM20A-203ENST00000590074 SUPT5HO00267 1087 aaKnown RBP37.94■■■■□ 3.66
FAM20A-203ENST00000590074 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
FAM20A-203ENST00000590074 NESP48681 1621 aa37.51■■■■□ 3.6
FAM20A-203ENST00000590074 LAMC3Q9Y6N6 1575 aa37.47■■■■□ 3.59
FAM20A-203ENST00000590074 CADPSQ9ULU8 1353 aa37.44■■■■□ 3.58
FAM20A-203ENST00000590074 CFTRP13569 1480 aa37.36■■■■□ 3.57
FAM20A-203ENST00000590074 PRDM2Q13029 1718 aa37.2■■■■□ 3.55
FAM20A-203ENST00000590074 PDS5BQ9NTI5 1447 aa37.16■■■■□ 3.54
FAM20A-203ENST00000590074 KIF21AQ7Z4S6 1674 aa37.12■■■■□ 3.53
FAM20A-203ENST00000590074 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
FAM20A-203ENST00000590074 FANCD2Q9BXW9 1451 aa37.03■■■■□ 3.52
FAM20A-203ENST00000590074 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
FAM20A-203ENST00000590074 THOC2Q8NI27 1593 aaKnown RBP36.87■■■■□ 3.49
FAM20A-203ENST00000590074 MRC2Q9UBG0 1479 aa36.77■■■■□ 3.48
FAM20A-203ENST00000590074 WDR62O43379 1518 aa36.67■■■■□ 3.46
FAM20A-203ENST00000590074 URB2Q14146 1524 aaKnown RBP36.66■■■■□ 3.46
FAM20A-203ENST00000590074 CUX2O14529 1486 aa36.55■■■■□ 3.44
FAM20A-203ENST00000590074 DNMBPQ6XZF7 1577 aa36.52■■■■□ 3.44
FAM20A-203ENST00000590074 TOPBP1Q92547 1522 aa36.51■■■■□ 3.44
FAM20A-203ENST00000590074 ABCC8Q09428 1581 aa36.48■■■■□ 3.43
FAM20A-203ENST00000590074 CUX1P39880 1505 aa36.45■■■■□ 3.43
FAM20A-203ENST00000590074 WRNQ14191 1432 aaPredicted RBP eCLIP36.36■■■■□ 3.41
FAM20A-203ENST00000590074 SYNJ1O43426 1573 aa36.31■■■■□ 3.4
FAM20A-203ENST00000590074 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
FAM20A-203ENST00000590074 TOP2BQ02880 1626 aa36.27■■■■□ 3.4
FAM20A-203ENST00000590074 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
FAM20A-203ENST00000590074 FGD5Q6ZNL6 1462 aa36.22■■■■□ 3.39
FAM20A-203ENST00000590074 IFT140Q96RY7 1462 aa36.12■■■■□ 3.37
FAM20A-203ENST00000590074 TARBP1Q13395 1621 aaKnown RBP36.11■■■■□ 3.37
FAM20A-203ENST00000590074 RAD54L2Q9Y4B4 1467 aa36.07■■■■□ 3.36
FAM20A-203ENST00000590074 SOGA1O94964 1423 aa36.06■■■■□ 3.36
FAM20A-203ENST00000590074 WDR97A6NE52 1622 aa35.97■■■■□ 3.35
FAM20A-203ENST00000590074 ZNF608Q9ULD9 1512 aaPredicted RBP35.96■■■■□ 3.35
FAM20A-203ENST00000590074 ABCA10Q8WWZ4 1543 aa35.9■■■■□ 3.34
FAM20A-203ENST00000590074 EIF4G3O43432 1585 aaKnown RBP35.87■■■■□ 3.33
FAM20A-203ENST00000590074 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.321e-6■■■■■ 27.8
FAM20A-203ENST00000590074 TDRD9Q8NDG6 1382 aaKnown RBP35.8■■■■□ 3.32
FAM20A-203ENST00000590074 TRIM41Q8WV44 630 aa35.79■■■■□ 3.32
FAM20A-203ENST00000590074 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
FAM20A-203ENST00000590074 CHIC1Q5VXU3 224 aa35.72■■■■□ 3.31
FAM20A-203ENST00000590074 GAPVD1Q14C86 1478 aa35.67■■■■□ 3.3
FAM20A-203ENST00000590074 PBRM1Q86U86 1689 aa35.64■■■■□ 3.3
FAM20A-203ENST00000590074 GRIN2BQ13224 1484 aa35.59■■■■□ 3.29
FAM20A-203ENST00000590074 KIF27Q86VH2 1401 aa35.54■■■■□ 3.28
FAM20A-203ENST00000590074 SNAPC4Q5SXM2 1469 aa35.49■■■■□ 3.27
FAM20A-203ENST00000590074 ERICH3Q5RHP9 1530 aa35.48■■■■□ 3.27
FAM20A-203ENST00000590074 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
FAM20A-203ENST00000590074 RUSC2Q8N2Y8 1516 aa35.43■■■■□ 3.26
FAM20A-203ENST00000590074 ADAMTS12P58397 1594 aa35.36■■■■□ 3.25
FAM20A-203ENST00000590074 IGF1RP08069 1367 aa35.34■■■■□ 3.25
FAM20A-203ENST00000590074 CHD1O14646 1710 aa35.34■■■■□ 3.25
FAM20A-203ENST00000590074 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
FAM20A-203ENST00000590074 CUL7Q14999 1698 aa35.27■■■■□ 3.24
FAM20A-203ENST00000590074 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
FAM20A-203ENST00000590074 FBLN2P98095 1184 aa35.21■■■■□ 3.23
FAM20A-203ENST00000590074 EEA1Q15075 1411 aa35.19■■■■□ 3.22
FAM20A-203ENST00000590074 CHMP7Q8WUX9 453 aaPredicted RBP35.19■■■■□ 3.22
FAM20A-203ENST00000590074 GRIN2AQ12879 1464 aa35.15■■■■□ 3.22
FAM20A-203ENST00000590074 CARMIL1Q5VZK9 1371 aa35.13■■■■□ 3.21
FAM20A-203ENST00000590074 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
FAM20A-203ENST00000590074 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
FAM20A-203ENST00000590074 CSRNP3Q8WYN3 585 aa35.05■■■■□ 3.2
FAM20A-203ENST00000590074 PRXQ9BXM0 1461 aa35.02■■■■□ 3.2
FAM20A-203ENST00000590074 RAPGEF2Q9Y4G8 1499 aa35■■■■□ 3.19
FAM20A-203ENST00000590074 CEP170Q5SW79 1584 aa34.99■■■■□ 3.19
FAM20A-203ENST00000590074 NUP160Q12769 1436 aa34.97■■■■□ 3.19
FAM20A-203ENST00000590074 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
FAM20A-203ENST00000590074 KIF21BO75037 1637 aa34.85■■■■□ 3.17
FAM20A-203ENST00000590074 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
FAM20A-203ENST00000590074 KIAA0586Q9BVV6 1533 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms