RNA–Protein interactions for RNA: ENST00000375556.8

FAM20A-202, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, humanhuman

TSL 2

Gene FAM20A, Length 2,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20A-202ENST00000375556 NISCHQ9Y2I1 1504 aa38.39■■■■□ 3.74
FAM20A-202ENST00000375556 CCDC180Q9P1Z9 1646 aa33.99■■■■□ 3.03
FAM20A-202ENST00000375556 ABCC9O60706 1549 aa33.23■■■□□ 2.91
FAM20A-202ENST00000375556 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
FAM20A-202ENST00000375556 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
FAM20A-202ENST00000375556 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
FAM20A-202ENST00000375556 NACADO15069 1562 aa31.92■■■□□ 2.7
FAM20A-202ENST00000375556 MYO15BQ96JP2 1530 aa31.74■■■□□ 2.67
FAM20A-202ENST00000375556 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
FAM20A-202ENST00000375556 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
FAM20A-202ENST00000375556 SCRIBQ14160 1630 aa31.13■■■□□ 2.57
FAM20A-202ENST00000375556 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
FAM20A-202ENST00000375556 BICRAQ9NZM4 1560 aa31.06■■■□□ 2.56
FAM20A-202ENST00000375556 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
FAM20A-202ENST00000375556 DNAJC5BQ9UF47 199 aa30.46■■■□□ 2.47
FAM20A-202ENST00000375556 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
FAM20A-202ENST00000375556 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
FAM20A-202ENST00000375556 CECR2Q9BXF3 1484 aa29.97■■■□□ 2.39
FAM20A-202ENST00000375556 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
FAM20A-202ENST00000375556 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.34
FAM20A-202ENST00000375556 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
FAM20A-202ENST00000375556 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
FAM20A-202ENST00000375556 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
FAM20A-202ENST00000375556 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
FAM20A-202ENST00000375556 PEG3Q9GZU2 1588 aa29.42■■■□□ 2.3
FAM20A-202ENST00000375556 WIZO95785 1651 aa29.35■■■□□ 2.29
FAM20A-202ENST00000375556 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
FAM20A-202ENST00000375556 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
FAM20A-202ENST00000375556 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
FAM20A-202ENST00000375556 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.22
FAM20A-202ENST00000375556 NESP48681 1621 aa28.84■■■□□ 2.21
FAM20A-202ENST00000375556 SUPT5HO00267 1087 aaKnown RBP28.79■■■□□ 2.2
FAM20A-202ENST00000375556 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
FAM20A-202ENST00000375556 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
FAM20A-202ENST00000375556 CADPSQ9ULU8 1353 aa28.65■■■□□ 2.18
FAM20A-202ENST00000375556 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
FAM20A-202ENST00000375556 CFTRP13569 1480 aa28.51■■■□□ 2.15
FAM20A-202ENST00000375556 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
FAM20A-202ENST00000375556 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
FAM20A-202ENST00000375556 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
FAM20A-202ENST00000375556 PRDM2Q13029 1718 aa28.3■■■□□ 2.12
FAM20A-202ENST00000375556 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
FAM20A-202ENST00000375556 CEP164Q9UPV0 1460 aa28.25■■■□□ 2.11
FAM20A-202ENST00000375556 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
FAM20A-202ENST00000375556 CUX2O14529 1486 aa28.14■■■□□ 2.1
FAM20A-202ENST00000375556 WDR62O43379 1518 aa28.08■■■□□ 2.09
FAM20A-202ENST00000375556 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
FAM20A-202ENST00000375556 TOPBP1Q92547 1522 aa27.9■■■□□ 2.06
FAM20A-202ENST00000375556 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
FAM20A-202ENST00000375556 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
FAM20A-202ENST00000375556 CUX1P39880 1505 aa27.78■■■□□ 2.04
FAM20A-202ENST00000375556 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
FAM20A-202ENST00000375556 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.02
FAM20A-202ENST00000375556 IFT140Q96RY7 1462 aa27.63■■■□□ 2.01
FAM20A-202ENST00000375556 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
FAM20A-202ENST00000375556 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
FAM20A-202ENST00000375556 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
FAM20A-202ENST00000375556 TARBP1Q13395 1621 aaKnown RBP27.6■■■□□ 2.01
FAM20A-202ENST00000375556 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
FAM20A-202ENST00000375556 SOGA1O94964 1423 aa27.57■■■□□ 2
FAM20A-202ENST00000375556 TOP2BQ02880 1626 aa27.54■■■□□ 2
FAM20A-202ENST00000375556 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
FAM20A-202ENST00000375556 AQRO60306 1485 aaKnown RBP eCLIP27.47■■□□□ 1.996e-7■■■■■ 29.4
FAM20A-202ENST00000375556 EIF4G3O43432 1585 aaKnown RBP27.45■■□□□ 1.98
FAM20A-202ENST00000375556 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
FAM20A-202ENST00000375556 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
FAM20A-202ENST00000375556 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
FAM20A-202ENST00000375556 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
FAM20A-202ENST00000375556 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
FAM20A-202ENST00000375556 DNAJC5Q9H3Z4 198 aa27.2■■□□□ 1.94
FAM20A-202ENST00000375556 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
FAM20A-202ENST00000375556 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
FAM20A-202ENST00000375556 SNAPC4Q5SXM2 1469 aa27.16■■□□□ 1.94
FAM20A-202ENST00000375556 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
FAM20A-202ENST00000375556 CHD1O14646 1710 aa27.11■■□□□ 1.93
FAM20A-202ENST00000375556 FBLN2P98095 1184 aa27.1■■□□□ 1.93
FAM20A-202ENST00000375556 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
FAM20A-202ENST00000375556 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
FAM20A-202ENST00000375556 CHMP7Q8WUX9 453 aaPredicted RBP27.01■■□□□ 1.91
FAM20A-202ENST00000375556 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
FAM20A-202ENST00000375556 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
FAM20A-202ENST00000375556 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
FAM20A-202ENST00000375556 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
FAM20A-202ENST00000375556 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
FAM20A-202ENST00000375556 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
FAM20A-202ENST00000375556 IGF1RP08069 1367 aa26.94■■□□□ 1.9
FAM20A-202ENST00000375556 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
FAM20A-202ENST00000375556 HRCP23327 699 aa26.89■■□□□ 1.9
FAM20A-202ENST00000375556 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
FAM20A-202ENST00000375556 CUL7Q14999 1698 aa26.78■■□□□ 1.88
FAM20A-202ENST00000375556 CLASP1Q7Z460 1538 aa26.77■■□□□ 1.88
FAM20A-202ENST00000375556 CARMIL1Q5VZK9 1371 aa26.76■■□□□ 1.87
FAM20A-202ENST00000375556 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
FAM20A-202ENST00000375556 NUP160Q12769 1436 aa26.72■■□□□ 1.87
FAM20A-202ENST00000375556 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
FAM20A-202ENST00000375556 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
FAM20A-202ENST00000375556 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
FAM20A-202ENST00000375556 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
FAM20A-202ENST00000375556 FAM9AQ8IZU1 332 aaPredicted RBP26.64■■□□□ 1.85
FAM20A-202ENST00000375556 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms