RNA–Protein interactions for RNA: ENST00000578574.1

SLC16A3-205, Transcript of solute carrier family 16 member 3, humanhuman

TSL 2

Gene SLC16A3, Length 958 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC16A3-205ENST00000578574 NISCHQ9Y2I1 1504 aa59.23■■■■■ 7.07
SLC16A3-205ENST00000578574 CCDC180Q9P1Z9 1646 aa53.04■■■■■ 6.08
SLC16A3-205ENST00000578574 ABCC9O60706 1549 aa52.36■■■■■ 5.97
SLC16A3-205ENST00000578574 RB1CC1Q8TDY2 1594 aa50.17■■■■■ 5.62
SLC16A3-205ENST00000578574 NACADO15069 1562 aa49.96■■■■■ 5.59
SLC16A3-205ENST00000578574 DCAF8L2P0C7V8 631 aa49.55■■■■■ 5.52
SLC16A3-205ENST00000578574 MYO15BQ96JP2 1530 aa49.48■■■■■ 5.51
SLC16A3-205ENST00000578574 ZCCHC6Q5VYS8 1495 aaKnown RBP49.22■■■■■ 5.47
SLC16A3-205ENST00000578574 UNC13AQ9UPW8 1703 aa49.12■■■■■ 5.45
SLC16A3-205ENST00000578574 DCAF1Q9Y4B6 1507 aa49.03■■■■■ 5.44
SLC16A3-205ENST00000578574 PABPN1Q86U42 306 aaKnown RBP eCLIP48.74■■■■■ 5.39
SLC16A3-205ENST00000578574 BICRAQ9NZM4 1560 aa48.69■■■■■ 5.39
SLC16A3-205ENST00000578574 DNAJC5BQ9UF47 199 aa48.6■■■■■ 5.37
SLC16A3-205ENST00000578574 SCRIBQ14160 1630 aa48.25■■■■■ 5.31
SLC16A3-205ENST00000578574 SHROOM4Q9ULL8 1493 aa48.16■■■■■ 5.3
SLC16A3-205ENST00000578574 EIF4G1Q04637 1599 aaKnown RBP47.45■■■■■ 5.19
SLC16A3-205ENST00000578574 CC2D2AQ9P2K1 1620 aa47.41■■■■■ 5.18
SLC16A3-205ENST00000578574 CECR2Q9BXF3 1484 aa47.14■■■■■ 5.14
SLC16A3-205ENST00000578574 SMARCA4P51532 1647 aa46.13■■■■■ 4.97
SLC16A3-205ENST00000578574 NCAPD3P42695 1498 aa46.07■■■■■ 4.97
SLC16A3-205ENST00000578574 ATAD2BQ9ULI0 1458 aa46■■■■■ 4.95
SLC16A3-205ENST00000578574 BAZ1AQ9NRL2 1556 aaPredicted RBP45.96■■■■■ 4.95
SLC16A3-205ENST00000578574 SMARCA2P51531 1590 aa45.94■■■■■ 4.94
SLC16A3-205ENST00000578574 HMGXB3Q12766 1538 aa45.84■■■■■ 4.93
SLC16A3-205ENST00000578574 PEG3Q9GZU2 1588 aa45.72■■■■■ 4.91
SLC16A3-205ENST00000578574 MROH2BQ7Z745 1585 aa45.62■■■■■ 4.89
SLC16A3-205ENST00000578574 BAZ1BQ9UIG0 1483 aaKnown RBP45.58■■■■■ 4.89
SLC16A3-205ENST00000578574 ERCC6Q03468 1493 aa45.18■■■■■ 4.82
SLC16A3-205ENST00000578574 NESP48681 1621 aa45.14■■■■■ 4.82
SLC16A3-205ENST00000578574 WIZO95785 1651 aa45.12■■■■■ 4.81
SLC16A3-205ENST00000578574 LAMC3Q9Y6N6 1575 aa45.01■■■■■ 4.8
SLC16A3-205ENST00000578574 CUX2O14529 1486 aa45■■■■■ 4.79
SLC16A3-205ENST00000578574 RSF1Q96T23 1441 aaPredicted RBP44.84■■■■■ 4.77
SLC16A3-205ENST00000578574 THOC2Q8NI27 1593 aaKnown RBP44.69■■■■■ 4.75
SLC16A3-205ENST00000578574 KIF21AQ7Z4S6 1674 aa44.68■■■■■ 4.74
SLC16A3-205ENST00000578574 CADPSQ9ULU8 1353 aa44.66■■■■■ 4.74
SLC16A3-205ENST00000578574 PDS5BQ9NTI5 1447 aa44.65■■■■■ 4.74
SLC16A3-205ENST00000578574 TOP2AP11388 1531 aaKnown RBP44.61■■■■■ 4.73
SLC16A3-205ENST00000578574 DNAJC5Q9H3Z4 198 aa44.3■■■■■ 4.68
SLC16A3-205ENST00000578574 CFTRP13569 1480 aa44.29■■■■■ 4.68
SLC16A3-205ENST00000578574 MRC2Q9UBG0 1479 aa44.27■■■■■ 4.68
SLC16A3-205ENST00000578574 CEP164Q9UPV0 1460 aa44.19■■■■■ 4.66
SLC16A3-205ENST00000578574 WDR62O43379 1518 aa44.18■■■■■ 4.66
SLC16A3-205ENST00000578574 FANCD2Q9BXW9 1451 aa44.17■■■■■ 4.66
SLC16A3-205ENST00000578574 PRDM2Q13029 1718 aa44.04■■■■■ 4.64
SLC16A3-205ENST00000578574 CCDC88BA6NC98 1476 aa44.03■■■■■ 4.64
SLC16A3-205ENST00000578574 URB2Q14146 1524 aaKnown RBP43.78■■■■■ 4.6
SLC16A3-205ENST00000578574 TOPBP1Q92547 1522 aa43.4■■■■■ 4.54
SLC16A3-205ENST00000578574 ABCC8Q09428 1581 aa43.37■■■■■ 4.53
SLC16A3-205ENST00000578574 DNMBPQ6XZF7 1577 aa43.33■■■■■ 4.53
SLC16A3-205ENST00000578574 IFT140Q96RY7 1462 aa43.28■■■■■ 4.52
SLC16A3-205ENST00000578574 ZNF608Q9ULD9 1512 aaPredicted RBP43.12■■■■■ 4.49
SLC16A3-205ENST00000578574 SUPT5HO00267 1087 aaKnown RBP43.08■■■■■ 4.49
SLC16A3-205ENST00000578574 TARBP1Q13395 1621 aaKnown RBP43.03■■■■■ 4.48
SLC16A3-205ENST00000578574 EIF4G3O43432 1585 aaKnown RBP43■■■■■ 4.47
SLC16A3-205ENST00000578574 POLA1P09884 1462 aaPredicted RBP43■■■■■ 4.47
SLC16A3-205ENST00000578574 OSCARQ8IYS5 282 aa42.92■■■■■ 4.46
SLC16A3-205ENST00000578574 CUX1P39880 1505 aa42.85■■■■■ 4.45
SLC16A3-205ENST00000578574 FGD5Q6ZNL6 1462 aa42.79■■■■■ 4.44
SLC16A3-205ENST00000578574 AQRO60306 1485 aaKnown RBP eCLIP42.77■■■■■ 4.444e-8■■■■■ 46
SLC16A3-205ENST00000578574 RAD54L2Q9Y4B4 1467 aa42.77■■■■■ 4.44
SLC16A3-205ENST00000578574 SOGA1O94964 1423 aa42.75■■■■■ 4.43
SLC16A3-205ENST00000578574 WDR97A6NE52 1622 aa42.69■■■■■ 4.42
SLC16A3-205ENST00000578574 CHD1O14646 1710 aa42.6■■■■■ 4.41
SLC16A3-205ENST00000578574 TDRD9Q8NDG6 1382 aaKnown RBP42.57■■■■■ 4.41
SLC16A3-205ENST00000578574 TRIM41Q8WV44 630 aa42.49■■■■■ 4.39
SLC16A3-205ENST00000578574 RIMBP3CA6NJZ7 1639 aa42.42■■■■■ 4.38
SLC16A3-205ENST00000578574 RIMBP3BA6NNM3 1639 aa42.42■■■■■ 4.38
SLC16A3-205ENST00000578574 RIMBP3Q9UFD9 1639 aa42.42■■■■■ 4.38
SLC16A3-205ENST00000578574 SNAPC4Q5SXM2 1469 aa42.4■■■■■ 4.38
SLC16A3-205ENST00000578574 GRIN2BQ13224 1484 aa42.37■■■■■ 4.37
SLC16A3-205ENST00000578574 BIVM-ERCC5R4GMW8 1640 aa42.37■■■■■ 4.37
SLC16A3-205ENST00000578574 MAGI1Q96QZ7 1491 aaPredicted RBP42.36■■■■■ 4.37
SLC16A3-205ENST00000578574 ABCA10Q8WWZ4 1543 aa42.36■■■■■ 4.37
SLC16A3-205ENST00000578574 TOP2BQ02880 1626 aa42.34■■■■■ 4.37
SLC16A3-205ENST00000578574 PBRM1Q86U86 1689 aa42.33■■■■■ 4.37
SLC16A3-205ENST00000578574 ARHGEF11O15085 1522 aa42.32■■■■■ 4.37
SLC16A3-205ENST00000578574 FBLN2P98095 1184 aa42.31■■■■■ 4.36
SLC16A3-205ENST00000578574 ABCA5Q8WWZ7 1642 aa42.3■■■■■ 4.36
SLC16A3-205ENST00000578574 WRNQ14191 1432 aaPredicted RBP eCLIP42.29■■■■■ 4.36
SLC16A3-205ENST00000578574 GAPVD1Q14C86 1478 aa42.28■■■■■ 4.36
SLC16A3-205ENST00000578574 SYNJ1O43426 1573 aa42.27■■■■■ 4.36
SLC16A3-205ENST00000578574 SYNJ2O15056 1496 aa42.18■■■■■ 4.34
SLC16A3-205ENST00000578574 CHMP7Q8WUX9 453 aaPredicted RBP42.12■■■■■ 4.33
SLC16A3-205ENST00000578574 CLASP1Q7Z460 1538 aa42.11■■■■■ 4.33
SLC16A3-205ENST00000578574 ADAMTS12P58397 1594 aa41.93■■■■■ 4.3
SLC16A3-205ENST00000578574 ARAP1Q96P48 1450 aa41.92■■■■■ 4.3
SLC16A3-205ENST00000578574 ERICH3Q5RHP9 1530 aa41.86■■■■■ 4.29
SLC16A3-205ENST00000578574 CYB5RLQ6IPT4 315 aa41.84■■■■■ 4.29
SLC16A3-205ENST00000578574 GRIN2AQ12879 1464 aa41.84■■■■■ 4.29
SLC16A3-205ENST00000578574 FHAD1B1AJZ9 1412 aa41.77■■■■■ 4.28
SLC16A3-205ENST00000578574 NUP160Q12769 1436 aa41.69■■■■■ 4.26
SLC16A3-205ENST00000578574 CEP170Q5SW79 1584 aa41.68■■■■■ 4.26
SLC16A3-205ENST00000578574 SHROOM2Q13796 1616 aa41.51■■■■■ 4.23
SLC16A3-205ENST00000578574 KIF27Q86VH2 1401 aa41.45■■■■■ 4.23
SLC16A3-205ENST00000578574 ERCC6L2Q5T890 1561 aa41.43■■■■■ 4.22
SLC16A3-205ENST00000578574 CUL7Q14999 1698 aa41.39■■■■■ 4.22
SLC16A3-205ENST00000578574 IGF1RP08069 1367 aa41.35■■■■■ 4.21
SLC16A3-205ENST00000578574 RUSC2Q8N2Y8 1516 aa41.34■■■■■ 4.21
SLC16A3-205ENST00000578574 TRHP20396 242 aaPredicted RBP41.2■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms