Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.97□□□□□ -0.01
GDF1P27539 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.97□□□□□ -0.01
GDF1P27539 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.97□□□□□ -0.01
GDF1P27539 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 AC026150.2-201ENST00000564693 1156 ntBASIC14.97□□□□□ -0.01
GDF1P27539 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 AC093512.1-201ENST00000617969 520 ntBASIC14.97□□□□□ -0.01
GDF1P27539 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 AC084121.4-201ENST00000641598 221 ntBASIC14.97□□□□□ -0.01
GDF1P27539 AF228730.8-201ENST00000642140 221 ntBASIC14.97□□□□□ -0.01
GDF1P27539 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 GPAA1P2-202ENST00000606848 1787 ntBASIC14.97□□□□□ -0.01
GDF1P27539 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GDF1P27539 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.97□□□□□ -0.01
GDF1P27539 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.96□□□□□ -0.01
GDF1P27539 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.96□□□□□ -0.01
GDF1P27539 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.96□□□□□ -0.01
GDF1P27539 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
GDF1P27539 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.96□□□□□ -0.01
GDF1P27539 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.96□□□□□ -0.01
GDF1P27539 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.96□□□□□ -0.01
GDF1P27539 SPDYE14P-201ENST00000442619 822 ntBASIC14.96□□□□□ -0.01
GDF1P27539 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 AC069262.1-201ENST00000539058 672 ntBASIC14.96□□□□□ -0.01
GDF1P27539 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.96□□□□□ -0.01
GDF1P27539 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.96□□□□□ -0.01
GDF1P27539 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
GDF1P27539 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
GDF1P27539 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.96□□□□□ -0.01
GDF1P27539 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDF1P27539 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
GDF1P27539 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
GDF1P27539 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GDF1P27539 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GDF1P27539 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GDF1P27539 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GDF1P27539 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 RNF216P1-203ENST00000404404 2427 ntBASIC14.95□□□□□ -0.02
GDF1P27539 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.95□□□□□ -0.02
GDF1P27539 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
GDF1P27539 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GDF1P27539 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.95□□□□□ -0.02
GDF1P27539 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GDF1P27539 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.95□□□□□ -0.02
GDF1P27539 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.95□□□□□ -0.02
GDF1P27539 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GDF1P27539 AC142381.1-201ENST00000426099 345 ntBASIC14.95□□□□□ -0.02
GDF1P27539 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms