RNA–Protein interactions for RNA: ENST00000402174.5

ZNRF3-201, Transcript of zinc and ring finger 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNRF3, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3-201ENST00000402174 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.44
ZNRF3-201ENST00000402174 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
ZNRF3-201ENST00000402174 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
ZNRF3-201ENST00000402174 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
ZNRF3-201ENST00000402174 ZCCHC6Q5VYS8 1495 aaKnown RBP30.79■■■□□ 2.52
ZNRF3-201ENST00000402174 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
ZNRF3-201ENST00000402174 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
ZNRF3-201ENST00000402174 ABCC9O60706 1549 aa29.69■■■□□ 2.34
ZNRF3-201ENST00000402174 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
ZNRF3-201ENST00000402174 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
ZNRF3-201ENST00000402174 NACADO15069 1562 aa29.04■■■□□ 2.24
ZNRF3-201ENST00000402174 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
ZNRF3-201ENST00000402174 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
ZNRF3-201ENST00000402174 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
ZNRF3-201ENST00000402174 CECR2Q9BXF3 1484 aa28.69■■■□□ 2.18
ZNRF3-201ENST00000402174 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
ZNRF3-201ENST00000402174 PABPN1Q86U42 306 aaKnown RBP eCLIP28.37■■■□□ 2.13
ZNRF3-201ENST00000402174 UNC13AQ9UPW8 1703 aa28.3■■■□□ 2.12
ZNRF3-201ENST00000402174 WIZO95785 1651 aa28.28■■■□□ 2.12
ZNRF3-201ENST00000402174 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
ZNRF3-201ENST00000402174 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
ZNRF3-201ENST00000402174 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
ZNRF3-201ENST00000402174 BICRAQ9NZM4 1560 aa28.02■■■□□ 2.08
ZNRF3-201ENST00000402174 SMARCA4P51532 1647 aa27.95■■■□□ 2.06
ZNRF3-201ENST00000402174 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
ZNRF3-201ENST00000402174 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
ZNRF3-201ENST00000402174 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
ZNRF3-201ENST00000402174 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.03
ZNRF3-201ENST00000402174 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
ZNRF3-201ENST00000402174 PCGF6Q9BYE7 350 aa27.54■■■□□ 2
ZNRF3-201ENST00000402174 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
ZNRF3-201ENST00000402174 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
ZNRF3-201ENST00000402174 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
ZNRF3-201ENST00000402174 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
ZNRF3-201ENST00000402174 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
ZNRF3-201ENST00000402174 SOGA1O94964 1423 aa27.15■■□□□ 1.94
ZNRF3-201ENST00000402174 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
ZNRF3-201ENST00000402174 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.929e-6■■■■■ 50.1
ZNRF3-201ENST00000402174 PPARGC1BQ86YN6 1023 aaKnown RBP27.04■■□□□ 1.92
ZNRF3-201ENST00000402174 TRIM26Q12899 539 aaPredicted RBP27■■□□□ 1.91
ZNRF3-201ENST00000402174 HRCP23327 699 aa26.99■■□□□ 1.91
ZNRF3-201ENST00000402174 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
ZNRF3-201ENST00000402174 SYNJ1O43426 1573 aa26.93■■□□□ 1.9
ZNRF3-201ENST00000402174 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
ZNRF3-201ENST00000402174 UBTFP17480 764 aaKnown RBP26.83■■□□□ 1.88
ZNRF3-201ENST00000402174 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
ZNRF3-201ENST00000402174 TTBK1Q5TCY1 1321 aaPredicted RBP26.74■■□□□ 1.87
ZNRF3-201ENST00000402174 EEA1Q15075 1411 aa26.68■■□□□ 1.86
ZNRF3-201ENST00000402174 CEP162Q5TB80 1403 aa26.68■■□□□ 1.86
ZNRF3-201ENST00000402174 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
ZNRF3-201ENST00000402174 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
ZNRF3-201ENST00000402174 TNIKQ9UKE5 1360 aa26.62■■□□□ 1.85
ZNRF3-201ENST00000402174 CFTRP13569 1480 aa26.58■■□□□ 1.85
ZNRF3-201ENST00000402174 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
ZNRF3-201ENST00000402174 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
ZNRF3-201ENST00000402174 CUX1P39880 1505 aa26.52■■□□□ 1.84
ZNRF3-201ENST00000402174 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
ZNRF3-201ENST00000402174 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
ZNRF3-201ENST00000402174 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
ZNRF3-201ENST00000402174 CADPSQ9ULU8 1353 aa26.44■■□□□ 1.82
ZNRF3-201ENST00000402174 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
ZNRF3-201ENST00000402174 KIF21BO75037 1637 aa26.37■■□□□ 1.81
ZNRF3-201ENST00000402174 CLIP1P30622 1438 aa26.31■■□□□ 1.8
ZNRF3-201ENST00000402174 NESP48681 1621 aa26.29■■□□□ 1.8
ZNRF3-201ENST00000402174 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
ZNRF3-201ENST00000402174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
ZNRF3-201ENST00000402174 PRXQ9BXM0 1461 aa26.19■■□□□ 1.78
ZNRF3-201ENST00000402174 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
ZNRF3-201ENST00000402174 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
ZNRF3-201ENST00000402174 CUX2O14529 1486 aa26.16■■□□□ 1.78
ZNRF3-201ENST00000402174 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
ZNRF3-201ENST00000402174 VPS8Q8N3P4 1428 aa26.07■■□□□ 1.76
ZNRF3-201ENST00000402174 IGF1RP08069 1367 aa26.06■■□□□ 1.76
ZNRF3-201ENST00000402174 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
ZNRF3-201ENST00000402174 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
ZNRF3-201ENST00000402174 CCER1Q8TC90 406 aaPredicted RBP26.02■■□□□ 1.76
ZNRF3-201ENST00000402174 ZEB1P37275 1124 aaPredicted RBP26.01■■□□□ 1.75
ZNRF3-201ENST00000402174 APLP2Q06481 763 aa26.01■■□□□ 1.75
ZNRF3-201ENST00000402174 PELP1Q8IZL8 1130 aaKnown RBP25.95■■□□□ 1.75
ZNRF3-201ENST00000402174 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
ZNRF3-201ENST00000402174 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
ZNRF3-201ENST00000402174 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
ZNRF3-201ENST00000402174 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
ZNRF3-201ENST00000402174 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
ZNRF3-201ENST00000402174 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
ZNRF3-201ENST00000402174 KANK4Q5T7N3 995 aaPredicted RBP25.86■■□□□ 1.73
ZNRF3-201ENST00000402174 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
ZNRF3-201ENST00000402174 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
ZNRF3-201ENST00000402174 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
ZNRF3-201ENST00000402174 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
ZNRF3-201ENST00000402174 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
ZNRF3-201ENST00000402174 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
ZNRF3-201ENST00000402174 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
ZNRF3-201ENST00000402174 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
ZNRF3-201ENST00000402174 ATP1B4Q9UN42 357 aaPredicted RBP25.65■■□□□ 1.7
ZNRF3-201ENST00000402174 GAPVD1Q14C86 1478 aa25.54■■□□□ 1.68
ZNRF3-201ENST00000402174 FHOD3Q2V2M9 1422 aa25.54■■□□□ 1.68
ZNRF3-201ENST00000402174 ITGAEP38570 1179 aa25.53■■□□□ 1.68
ZNRF3-201ENST00000402174 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
ZNRF3-201ENST00000402174 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.671e-6■■■■□ 24.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms