RNA–Protein interactions for RNA: ENST00000324894.12

GTPBP3-201, Transcript of GTP binding protein 3, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTPBP3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-201ENST00000324894 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
GTPBP3-201ENST00000324894 CCDC180Q9P1Z9 1646 aa32.42■■■□□ 2.78
GTPBP3-201ENST00000324894 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
GTPBP3-201ENST00000324894 DCAF1Q9Y4B6 1507 aa30.87■■■□□ 2.53
GTPBP3-201ENST00000324894 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
GTPBP3-201ENST00000324894 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
GTPBP3-201ENST00000324894 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
GTPBP3-201ENST00000324894 ABCC9O60706 1549 aa30.14■■■□□ 2.42
GTPBP3-201ENST00000324894 NACADO15069 1562 aa30.01■■■□□ 2.39
GTPBP3-201ENST00000324894 SCRIBQ14160 1630 aa29.86■■■□□ 2.37
GTPBP3-201ENST00000324894 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
GTPBP3-201ENST00000324894 RB1CC1Q8TDY2 1594 aa29.65■■■□□ 2.34
GTPBP3-201ENST00000324894 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
GTPBP3-201ENST00000324894 RSF1Q96T23 1441 aaPredicted RBP29.12■■■□□ 2.25
GTPBP3-201ENST00000324894 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
GTPBP3-201ENST00000324894 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
GTPBP3-201ENST00000324894 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
GTPBP3-201ENST00000324894 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
GTPBP3-201ENST00000324894 BICRAQ9NZM4 1560 aa28.78■■■□□ 2.2
GTPBP3-201ENST00000324894 WIZO95785 1651 aa28.73■■■□□ 2.19
GTPBP3-201ENST00000324894 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
GTPBP3-201ENST00000324894 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
GTPBP3-201ENST00000324894 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
GTPBP3-201ENST00000324894 PEG3Q9GZU2 1588 aa28.26■■■□□ 2.11
GTPBP3-201ENST00000324894 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
GTPBP3-201ENST00000324894 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
GTPBP3-201ENST00000324894 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
GTPBP3-201ENST00000324894 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
GTPBP3-201ENST00000324894 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
GTPBP3-201ENST00000324894 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
GTPBP3-201ENST00000324894 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
GTPBP3-201ENST00000324894 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
GTPBP3-201ENST00000324894 ABCC8Q09428 1581 aa27.7■■■□□ 2.03
GTPBP3-201ENST00000324894 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
GTPBP3-201ENST00000324894 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
GTPBP3-201ENST00000324894 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
GTPBP3-201ENST00000324894 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
GTPBP3-201ENST00000324894 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
GTPBP3-201ENST00000324894 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
GTPBP3-201ENST00000324894 EEA1Q15075 1411 aa27.26■■□□□ 1.95
GTPBP3-201ENST00000324894 SOGA1O94964 1423 aa27.22■■□□□ 1.95
GTPBP3-201ENST00000324894 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
GTPBP3-201ENST00000324894 CFTRP13569 1480 aa27.19■■□□□ 1.94
GTPBP3-201ENST00000324894 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
GTPBP3-201ENST00000324894 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
GTPBP3-201ENST00000324894 EHMT2Q96KQ7 1210 aa27.1■■□□□ 1.93
GTPBP3-201ENST00000324894 CSRNP3Q8WYN3 585 aa27.02■■□□□ 1.92
GTPBP3-201ENST00000324894 CUX1P39880 1505 aa26.98■■□□□ 1.91
GTPBP3-201ENST00000324894 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
GTPBP3-201ENST00000324894 KIF21BO75037 1637 aa26.96■■□□□ 1.91
GTPBP3-201ENST00000324894 PCGF6Q9BYE7 350 aa26.95■■□□□ 1.9
GTPBP3-201ENST00000324894 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
GTPBP3-201ENST00000324894 TNIKQ9UKE5 1360 aa26.91■■□□□ 1.9
GTPBP3-201ENST00000324894 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
GTPBP3-201ENST00000324894 TRIM26Q12899 539 aaPredicted RBP26.83■■□□□ 1.89
GTPBP3-201ENST00000324894 CEP162Q5TB80 1403 aa26.83■■□□□ 1.88
GTPBP3-201ENST00000324894 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
GTPBP3-201ENST00000324894 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
GTPBP3-201ENST00000324894 FANCD2Q9BXW9 1451 aa26.71■■□□□ 1.87
GTPBP3-201ENST00000324894 LAMC3Q9Y6N6 1575 aa26.69■■□□□ 1.86
GTPBP3-201ENST00000324894 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
GTPBP3-201ENST00000324894 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
GTPBP3-201ENST00000324894 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
GTPBP3-201ENST00000324894 NESP48681 1621 aa26.64■■□□□ 1.85
GTPBP3-201ENST00000324894 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
GTPBP3-201ENST00000324894 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
GTPBP3-201ENST00000324894 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
GTPBP3-201ENST00000324894 HRCP23327 699 aa26.58■■□□□ 1.85
GTPBP3-201ENST00000324894 CUX2O14529 1486 aa26.5■■□□□ 1.83
GTPBP3-201ENST00000324894 CLIP1P30622 1438 aa26.5■■□□□ 1.83
GTPBP3-201ENST00000324894 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
GTPBP3-201ENST00000324894 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
GTPBP3-201ENST00000324894 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
GTPBP3-201ENST00000324894 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
GTPBP3-201ENST00000324894 PPARGC1BQ86YN6 1023 aaKnown RBP26.38■■□□□ 1.81
GTPBP3-201ENST00000324894 URB2Q14146 1524 aaKnown RBP26.37■■□□□ 1.81
GTPBP3-201ENST00000324894 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
GTPBP3-201ENST00000324894 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
GTPBP3-201ENST00000324894 IGF1RP08069 1367 aa26.35■■□□□ 1.81
GTPBP3-201ENST00000324894 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
GTPBP3-201ENST00000324894 RAD54L2Q9Y4B4 1467 aa26.31■■□□□ 1.8
GTPBP3-201ENST00000324894 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
GTPBP3-201ENST00000324894 CUL7Q14999 1698 aa26.22■■□□□ 1.79
GTPBP3-201ENST00000324894 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
GTPBP3-201ENST00000324894 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
GTPBP3-201ENST00000324894 RANGAP1P46060 587 aaPredicted RBP26.15■■□□□ 1.78
GTPBP3-201ENST00000324894 ARHGAP35Q9NRY4 1499 aa26.11■■□□□ 1.77
GTPBP3-201ENST00000324894 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
GTPBP3-201ENST00000324894 TTBK1Q5TCY1 1321 aaPredicted RBP26.09■■□□□ 1.77
GTPBP3-201ENST00000324894 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
GTPBP3-201ENST00000324894 CTTNBP2Q8WZ74 1663 aa26.06■■□□□ 1.76
GTPBP3-201ENST00000324894 APLP2Q06481 763 aa26.02■■□□□ 1.76
GTPBP3-201ENST00000324894 PELP1Q8IZL8 1130 aaKnown RBP26.02■■□□□ 1.76
GTPBP3-201ENST00000324894 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
GTPBP3-201ENST00000324894 ZEB1P37275 1124 aaPredicted RBP25.99■■□□□ 1.75
GTPBP3-201ENST00000324894 TDRD9Q8NDG6 1382 aaKnown RBP25.97■■□□□ 1.75
GTPBP3-201ENST00000324894 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
GTPBP3-201ENST00000324894 WDR62O43379 1518 aa25.95■■□□□ 1.75
GTPBP3-201ENST00000324894 EFCAB5A4FU69 1503 aa25.89■■□□□ 1.74
GTPBP3-201ENST00000324894 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms